Gene Fnod_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0380 
Symbol 
ID5453166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp414945 
End bp415631 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content32% 
IMG OID640874129 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001409902 
Protein GI154249077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTACA TTGAACTTGT TGAAGCTACA AAGGTATTAA AAATAGGTTT GCCTGCTAAC 
GTAATAATTA CTCTTGTAAA AGAGCTGGAA GGAACATATA AAAGTAATAT AATAGATATA 
GACATGGATA GAAAAATATT ATTCCTTTCA ATACCTTCTT TCAAAGGAAG GTTTGTTCCT 
ATTCCAAAAG GAGTTAGGAT AACTGTAAAT GTGTTTGAGA GGTCTTCGGT TTATGAATTT 
CAGACAGTCT CATTAGGTGT AATTAAAAAA GATAATATAT ATGCACTCCC TGTTCCTTTT 
CCTGATGTTG TTAGAAAAAC TGAAAAGAGA AAATTCGTCA GAATCCCTCT TTACTTAGAT 
GGACGTTTTT ATCTCTCAAC AGAGCCCGAA GCGGAATCTT TTGTTTTCAC AACGAGAAAT 
GTGAGTGCTG GTGGATTACT GATGGTTACT AAAAAACATT TGAATGTAAA TGACATAATT 
TTTATAGACA TGAAATTTAA TGATGAGCTT ATTCTGAAAA GACAGAAATC AAAAATTGTT 
AGAGAAGATT CAAAAGTAGA AGATGGTTAC GTCTTCGGGG TACAATTTTT AGATCTTCCG 
CAGAATTTAG AAAAGGCCCT TGTTAGATTT ATATTCCAGC AAGAATTAAA ATTAAAGAAT 
GTTCAAGGTG CTGCTAAAGG CAGATGA
 
Protein sequence
MPYIELVEAT KVLKIGLPAN VIITLVKELE GTYKSNIIDI DMDRKILFLS IPSFKGRFVP 
IPKGVRITVN VFERSSVYEF QTVSLGVIKK DNIYALPVPF PDVVRKTEKR KFVRIPLYLD 
GRFYLSTEPE AESFVFTTRN VSAGGLLMVT KKHLNVNDII FIDMKFNDEL ILKRQKSKIV 
REDSKVEDGY VFGVQFLDLP QNLEKALVRF IFQQELKLKN VQGAAKGR