| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0375 |
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| Symbol | trmE |
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| ID | 5451617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 408746 |
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| End bp | 410125 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640874124 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001409897 |
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| Protein GI | 154249072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTT TGAGAGGTGA TAATTTGAAC AGAGATACTA TAGTTGCACT TTCAACACCA
CCAGGAATCG GAGCTATAGC AATAATTAGA ATAAGTGGCA ATAAAAGTCT GGAATTAACT
GAAAAAACAA TAAAAAATAA AAAAATAAAC ATAAAAACAT TGGAAGAAAG AAGAATTAAT
CATGGATATT TTTACGATGA AAATGGTGAA ATTATAGATG AGATAATGTT CGTTTATTTT
AAATCTCCAA GAAGTTACAC AGGAGAAGAC ATGGTAGAGA TATATTGTCA CGGTGGAATA
CTTGTGACAA ATAAAATTAT AGATACACTA TTAAAACTTG GCGCAAGACT TGCAGAAAAC
GGTGAATTTA CTAGAAGAGC ATTTCTTAAT GGTAAAATTG ATTTAATCAA AGCAGAATCT
ATACTCCAAA TAATTGAAGC AAAGAGCGAA AAGAGTCTTA AACTCGCTCT TGATAATCTG
AAAGGTAAAC TTTCAAATGA AATTGAGTAT TTACGCTCCA GCTTAATAAA CGTTTTGTCA
AAGATTGAAG TTTCAATTGA TTATGGTGAT GACATAGACG TTCCCAAAGA AGAGATACTT
AACGATCTTA TAAATGTTCA ATCTTTTTTG AAAGAAAAGA TTAAGCATGC CGATAAAGGT
TTACATATTT CAACTGGTGT AACTATGGCA ATAGTCGGAA AACCTAACGT CGGTAAAAGT
ACTTTATTAA ACAGATTGTT AGTTGAAGAT CGTGCCATAG TAACGGACAT ACCAGGTACA
ACACGTGATG TTATAAAAGG TGAATTGAAG ATAAAAGGCG TCCATTTTAT CATATCAGAT
ACCGCTGGTA TAAGAATGAC CGAAGATAAA GTGGAGAAAA TAGGTATTGA AAAAGCTCTA
AATGAAGCAA AAAAATCAGA TGTCATTTTG TTTTTGCTGG ACGCGACAAC AGGTTTTACT
AATGAAGATG AATATATATA CAATTTAATC AAAGATTGTA ATTTCATACC TGTTTGGAAT
AAAATTGATA TAGCTGAGAA AGTAGACAAA GACATAGTAT TCTTGAGAAA TAGTGTAGTG
ATAAGTGCTG AAACTGGTAG AGGAATGAGA GAGCTTGAAG AAAAGATACT TGAATCTGTT
AAAGTTTTAG TAGAAGATGG CGAATTATCT CATGTCACAT CGAAAAGGCA ATTAGAATAT
CTTAAACGCG TCGAATACAA TATTATAAAA GCCATAAATT CTCTGAAAAA AAATATGCCA
CTAGATATAA TATCAATTGA TATAAGAAAT GGTTTAGAAC AATTAGATGA ACTAATGGGT
AGAAATTTTA CAGAGGACTT GCTGGACAAT ATCTTTTCAA ATTTTTGTGT TGGAAAGTAA
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| Protein sequence | MNILRGDNLN RDTIVALSTP PGIGAIAIIR ISGNKSLELT EKTIKNKKIN IKTLEERRIN
HGYFYDENGE IIDEIMFVYF KSPRSYTGED MVEIYCHGGI LVTNKIIDTL LKLGARLAEN
GEFTRRAFLN GKIDLIKAES ILQIIEAKSE KSLKLALDNL KGKLSNEIEY LRSSLINVLS
KIEVSIDYGD DIDVPKEEIL NDLINVQSFL KEKIKHADKG LHISTGVTMA IVGKPNVGKS
TLLNRLLVED RAIVTDIPGT TRDVIKGELK IKGVHFIISD TAGIRMTEDK VEKIGIEKAL
NEAKKSDVIL FLLDATTGFT NEDEYIYNLI KDCNFIPVWN KIDIAEKVDK DIVFLRNSVV
ISAETGRGMR ELEEKILESV KVLVEDGELS HVTSKRQLEY LKRVEYNIIK AINSLKKNMP
LDIISIDIRN GLEQLDELMG RNFTEDLLDN IFSNFCVGK
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