Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0361 |
Symbol | |
ID | 5452344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 392610 |
End bp | 392993 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874107 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001409883 |
Protein GI | 154249058 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTGATA ATCAATTCAA TACCCTTGAA GAGTTCAAAA AATTCCGCGA AAAAATGAAT GAAGAAATAC TTAAAAGAGG AACAACTAAC ACAAAACGCT TTTGGGCACT TGATAGCGCA GTATACAAAG AGGGTGCAAT TGATAGCAAA ACAAAAGAAT TAATGGGACT TGTTGCTTCT ATGGTATTAA GATGTGACGA TTGTATAACT TACCATATGA TAAGATGCGC AGAACTTGGC ACAAGTGATG AAGAATTTTT CGAAGTATTT GATGTGGCAC TTATAGTCGG TGGGTCAATA GTTATACCAC ACTTAAGAAG GGCTGTAAAC ACATTGTTAG AAATCCGGAG GATGCAATTG AATGGCGAGA GTATTTCTAT TTGA
|
Protein sequence | MSDNQFNTLE EFKKFREKMN EEILKRGTTN TKRFWALDSA VYKEGAIDSK TKELMGLVAS MVLRCDDCIT YHMIRCAELG TSDEEFFEVF DVALIVGGSI VIPHLRRAVN TLLEIRRMQL NGESISI
|
| |