Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0339 |
Symbol | |
ID | 5453320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 366386 |
End bp | 367576 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874085 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001409861 |
Protein GI | 154249036 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000206565 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTG TTGCAAAAAT CGTGGATGGT GTTTACTACG TTGGAGTAAA CGATAGAGAT ACTCATCTAT TTGAAAACAT TTGGCCACTC ACAAAGGGTG TTTCGTACAA CTCCTATCTA ATAGTAGATG AAAAAACTGC GCTTATCGAT ACTGTAAAAG TCAATAAAAT GAAAGAGTAC ATCGAAAAGA TAAACCAAAT ATTAGATGGC AAATCTCTTG ATTATCTAAT TATTAACCAT ATGGAACCAG ACCATTCCGG TGCAATTTCT TCTATTGTCC ACGCATTTCC AAATGTAAAA ATTGTGGGTA ACAAAAAAAC GTTCGAATTC ATAAAAGCCA TGTACCATTT AGAAGGTAAT TTTTATGAAG TAAAAGAGGG AGACGAAATT AATCTTGGAA ACAAAACGTT AAAATTTTAC ATGACGCCGA TGGTACATTG GCCTGAAACA ATGATGACTT ACGAAGTAAA TAACAAAATA CTTTTCGCCG GTGATGCCTT TGGTGGCTTT GGATCTTTAG ACGGTGGAAT ATTTGATGAC GAAGTTGACG TAAATTATTT CGAAAACGAA ATCAGAAGGT ACTATTCAAA CATAGTGGGA AAATTCGGCC CAATGGTTCA AAAGGCTCTT CAAAAGCTTA GTTCTTTAGA GATTAAAATC GTATGCTCGA CACACGGTCC CGTTTGGAGA ACCAATCCCG GACATATCAT ATCAGCTTAC GATAGATGGA GTAAATACGA ATATGAAGAA GGTGTTGTCA TAGCTTACGG TACAATGTAT GGCAATACGG AAAAGATGGC AGATTATATA GCAAGGGTAC TTGCTGAAGA AGGTGTGAAG AATATAAGAG TCATGAACAC ATCAACAACG CATGAATCAT TTATAATCAA CGAAATTTGG AGATTTAAAG GTATTATTCT CGGCACGTGC ACGTATAACA ATTGGATATT CCCACCAATG GAAAATTTAA TTATAAATCT TTCCCACAAA GGACTTCCAA ATCGCGTTTT CGGCGTTTTC GGAACATATG GATGGAGTGG TGGAGGAGTT AAAGGTATCG TGGAATACAT TCAAAAGAAT AAATGGGAAA TGGTTGGAGA ACCTGTAGAA GTGCAGTTTT CACCTAAAGA AGAAGATTTT GAAAGACTGA GAAAATTAGC TGTAGAAATG GCAAAAGCGG TAAAAAAATA A
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Protein sequence | MEIVAKIVDG VYYVGVNDRD THLFENIWPL TKGVSYNSYL IVDEKTALID TVKVNKMKEY IEKINQILDG KSLDYLIINH MEPDHSGAIS SIVHAFPNVK IVGNKKTFEF IKAMYHLEGN FYEVKEGDEI NLGNKTLKFY MTPMVHWPET MMTYEVNNKI LFAGDAFGGF GSLDGGIFDD EVDVNYFENE IRRYYSNIVG KFGPMVQKAL QKLSSLEIKI VCSTHGPVWR TNPGHIISAY DRWSKYEYEE GVVIAYGTMY GNTEKMADYI ARVLAEEGVK NIRVMNTSTT HESFIINEIW RFKGIILGTC TYNNWIFPPM ENLIINLSHK GLPNRVFGVF GTYGWSGGGV KGIVEYIQKN KWEMVGEPVE VQFSPKEEDF ERLRKLAVEM AKAVKK
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