| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0308 |
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| Symbol | |
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| ID | 5452364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 333499 |
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| End bp | 334824 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874053 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001409830 |
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| Protein GI | 154249005 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.426716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTAAAT TAGCCCTTCC ATCGATTGTT GGTAGTGTTA TGCAATCGAT GTACGATATA
GTGGATTTAT TTTGGATAGG TAGGCTATCG TCTAAGGCGA TAGCCGGTGT TACTTTATTT
TCGACAATTT TTTGGATAGT CGAGATACTC AACGAAATAA TAGGGACATC CTCCGTCTCT
ATGATTTCAC AATCTTACGG AAAAGGAGAC AAGAAGCTAA CAAGTAAGAT AATCGAGCAA
ACTCTTATAT TCAAAGGTTT CGTCGCTGTT TTAGCCTCTG CAATACTTTT GGTTGTATTA
AAACCGTTGA TGAATTTTTA TACGAAAGAC ACCGAAGTTG TAAAGGCAGC AATTGATTAT
GGATACATAA GAGTTTTCTT TATGTTTGCG TTTTTTATGA CTTATTCCAC ATTTACCGCC
CTTAGAAACA TCGGTAGCGC GCATCTTGCT ATGGTTAATA TGGTTACCGG TTCTATTGTA
AATATCTTTT TAGATCCGAT TTTCATGTTT GATAGGGTTC CTTTTATCAA TATCCGAGGT
TTCAATTTGG GAATTTCTGG TGCCGCATGG GCAACAGTTG TTTCTACTTT TATATCCCTT
GGATTAGGTT TATTCTTTTT ATTTAGAGGG GTTAAGGACG TTAAGATATC CCTTAAAGGT
TTGTTTGTTT TAGATTGGAA AATAGATGCA AAACTAATGA CAATAGGTCT TCCCACTGGA
GGAGAGATGT TACTTAGAAC GCTTTCTTAC GCGTTTTTGA TAAAATTTGC CTCTGGATTC
GGTTCAGAAT ATATAAGCAC AATCGGTATC CTTGAAAGAA TAATTGGTTT TTCAAATATA
CCTATCTTTG GTTTATCAAT GGCAACTAGT ACACTTGTTG GTTTTTTCTT AGGTAAAGAT
GATGAAAAAG AGGCAAAAAA TATTGTGTTT GTTTCGTTAT TGTACGGTTT ATTGATAATA
TCCATAGCTG TTGTTGTGTT AATTACACTC AGAAGTAATA TCTATTTATT TTTCACAAAT
GATATGAATG TAATTAGAAT TGGAAGTCAA GGCTCTTTAA TTGTAGTTCC AACATTACTT
TTCACAACAG TGAGTTGGCT ATTATCAAGT GGTTTTTTCG GCGCGGGGCT AACGATTTTT
ACCTTCATAT CAAGCTTTTT AAGTAGATGG GCTATTATGA TCCCATATCT TTTCATTACT
GTAAGTATAC TTAAATTAAG CGCGATTAAC TTTTGGCTTT CTTTCATGAT GGCTGAATTG
TTTGAGATGT TTCTTGTTTT GTACTTTTTC ATGAAATATC CGTGGACGAA AAAAAGGGTG
GTGTAG
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| Protein sequence | MFKLALPSIV GSVMQSMYDI VDLFWIGRLS SKAIAGVTLF STIFWIVEIL NEIIGTSSVS
MISQSYGKGD KKLTSKIIEQ TLIFKGFVAV LASAILLVVL KPLMNFYTKD TEVVKAAIDY
GYIRVFFMFA FFMTYSTFTA LRNIGSAHLA MVNMVTGSIV NIFLDPIFMF DRVPFINIRG
FNLGISGAAW ATVVSTFISL GLGLFFLFRG VKDVKISLKG LFVLDWKIDA KLMTIGLPTG
GEMLLRTLSY AFLIKFASGF GSEYISTIGI LERIIGFSNI PIFGLSMATS TLVGFFLGKD
DEKEAKNIVF VSLLYGLLII SIAVVVLITL RSNIYLFFTN DMNVIRIGSQ GSLIVVPTLL
FTTVSWLLSS GFFGAGLTIF TFISSFLSRW AIMIPYLFIT VSILKLSAIN FWLSFMMAEL
FEMFLVLYFF MKYPWTKKRV V
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