| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0153 |
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| Symbol | |
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| ID | 5452665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 155625 |
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| End bp | 156332 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640873900 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001409677 |
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| Protein GI | 154248852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00359094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTCGG AAATATTGAA TAGTTATTCA ATGATAAAGA AAAATTACGA ATACGTCATG
AATAAAATTT CGGAACATGC ACTGAAAGTT GGCAGAAAGC CAGATGAAAT AAAGATAGTC
GCTGTTACAA AGACTCATCC TGTTGAGATT ATAAAAACTG CTTACGATGT TGGGTTAAGA
ATTTTTGGTG AAAATTACGC GCAAGAACTT CGTGATAAAT CTGAGCAATT AAATTTTCCA
GACATTGAAT GGCATTACAT AGGGCGTATT CAAACAAATA AATTGAAATA CATAGTTCCT
GTTGCTTATC TCATTCATTC AGTTTATAGG ATAAACGAAA TTGAGGAAAT CAACAAAATA
GCTTCGAAAA TGGGAAAAAT TCAAAAAATT TTGATAGAAG TTAATGTTTC AGGTGAAGAA
ACAAAAGGTG GTATTAGTCC AAATAATATT GAAGATCTAT TGAAGGAATC TGAAAAGTTT
AAAAACGTCC AAGTTATTGG ACTTATGACG ATGGCTCCAT TTGTTGAACC GGAATCTACA
AGGAAATATT TTAGGATGTT GCGTGAAATT AGAGATGGTA TCTCAAAGAG ATTTCCGAAT
TTGAAAGAAC TATCTATGGG TATGAGTAAC GATTTTGAAG TGGCAGTTGA AGAAGGAAGT
ACGATAGTTA GAATAGGTAC TGCGATATTT GGTGAAAGGG GGAAATAA
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| Protein sequence | MDSEILNSYS MIKKNYEYVM NKISEHALKV GRKPDEIKIV AVTKTHPVEI IKTAYDVGLR
IFGENYAQEL RDKSEQLNFP DIEWHYIGRI QTNKLKYIVP VAYLIHSVYR INEIEEINKI
ASKMGKIQKI LIEVNVSGEE TKGGISPNNI EDLLKESEKF KNVQVIGLMT MAPFVEPEST
RKYFRMLREI RDGISKRFPN LKELSMGMSN DFEVAVEEGS TIVRIGTAIF GERGK
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