Gene Fnod_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0093 
Symbol 
ID5452999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp98580 
End bp99974 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content33% 
IMG OID640873839 
Productstage II sporulation E family protein 
Protein accessionYP_001409617 
Protein GI154248792 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGGAAA ATGAATTAAA TGAGACGTTT GGTAAAATTG TTCAGACTTG TAAAAAAATA 
GCTGAAAATT TTGATATAGA GCTTGGAGAT ATAAATGATT TTGAAACATT AAATACGAAG
TTAAATGAAC TTTCTGAGTA TATAAGTAAA TGGGTGTATG ACCAACGATC GAATTACGAT
GCTTTGCAAC AACTTATAGA TGCACAGTTA GAAGAATTAA CAGCCGCATA TGAAGGTTTA
TCTGCGCTTT TTGAGATAAA TAAGATCATA TCTTCAGTTG ACGAACCTTG GATGATTTTA
AAAAGCGTTC TTAAGCTTCT AAAAAATGCG GTAAGTTATT CTTTTGGTAT TATTAAATTA
GAAATAAACA ATAATATTTA TACGGAATAT TACGGTTTAG ACCAGGAAAA GTGTGAAAAT
ATAATTGGAC TATTTGAGGA AAAATACCTG CAAAATGAGG AAACAGTCTT TGTTGATTAT
GAAAAGGATA TCGGTGGTTA TATACTTATT CCACTTGTTT CGGAACTTGG AAGATATGGT
TACTTTGGAC TTTCAAATAT AGGTTCAAAA CGTACATTTA CAGCTGGTGA CAAAAAAATT
GCTGAAGCAG TTGCGCAACA GATATTAACC GCAGTCAGTC GATACATAAT ATTGCAGCGT
GAAATAGAGA AGAAAAGATT GGAAGAACAG TTACAAATCG CAAGAAGTAT CCAGCAAGGA
TTACTTCCAA GCAAATTTCC TGTTAGCGAG AATTTTGACA TAGGCGCAAA AAGTGTTTCT
GCAGTCCAAG TTGGTGGAGA TTATTACGAT GTGATTCAAG GGAATGATGG TTCGATTATT
TGCTGTGTGG CTGATGTTTC TGGTAAAGGT TTACCTGCAG CACTTATAAT GTCTTCTTTT
AGAAGTATGT TTAGGATTTC TGGAAAGGTA TCAAACGACT TGAGAATGTT AGCCTCTCAA
TTTGATGCAA TGATATATTC TGATTTTGAA ACAGGAAGGT TTATAACAGC TATTATATTT
AAAGTTTTTC CAGATGGCTC TGTAGAAATA ATTAATGCAG GGCACGATCC CTTATATATA
ATTAGAGATA ACAAAATAAT CAAAATAGAA TCTACCGGGA CACCTTTTGG AATACTTGGT
GATGGAATAT ACGAAGTTAA AAAATTACAA GCACAAAAGG GTGATGTCTT TATAGCGTTT
ACTGATGGTG TTGTTGAAGC TAGGAACATT AAAAACGAAG AATTTGGCTT TGATAGATTG
GATGAACTTG TTTTAAGAAC AAGATATTTA AGAGCGACAG ATATAGTTGA TAAGATTATG
AATGCTGTTT TTGAATTCTC GCAAGGTACT ATGCAACATG ATGATACAAC TGTTCTTGTT
TTAAAATTCG AATAA
 
Protein sequence
MLENELNETF GKIVQTCKKI AENFDIELGD INDFETLNTK LNELSEYISK WVYDQRSNYD 
ALQQLIDAQL EELTAAYEGL SALFEINKII SSVDEPWMIL KSVLKLLKNA VSYSFGIIKL
EINNNIYTEY YGLDQEKCEN IIGLFEEKYL QNEETVFVDY EKDIGGYILI PLVSELGRYG
YFGLSNIGSK RTFTAGDKKI AEAVAQQILT AVSRYIILQR EIEKKRLEEQ LQIARSIQQG
LLPSKFPVSE NFDIGAKSVS AVQVGGDYYD VIQGNDGSII CCVADVSGKG LPAALIMSSF
RSMFRISGKV SNDLRMLASQ FDAMIYSDFE TGRFITAIIF KVFPDGSVEI INAGHDPLYI
IRDNKIIKIE STGTPFGILG DGIYEVKKLQ AQKGDVFIAF TDGVVEARNI KNEEFGFDRL
DELVLRTRYL RATDIVDKIM NAVFEFSQGT MQHDDTTVLV LKFE