Gene Fnod_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0050 
Symbol 
ID5452990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp53304 
End bp54347 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content37% 
IMG OID640873800 
Productinner-membrane translocator 
Protein accessionYP_001409578 
Protein GI154248753 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.617843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TCATAGAGTT AATAAAGAAG ACAGATATAC CTACCTTAGT AATAATTTTA 
TTTCTCATAG GTCTATTCAT CCTTGCAGCT GGAACAAAGA TGTCTATAAC TTCACTCCTC
AGCGATTCGA TTGTTAGAGT CGGTATGAAT GGTGTGTTAG TGCTTGCAAT GCTACCAACT
ATAAGAGCGG GAATAGGTCC AAACTTTGGT TTACCAGTCG GAATTATAGG TGGTCTCTTA
GGTGGATTAA TTGTAATGCA ATTGCAAATA ACGGGATTTT GGGGATTCTT AGTTGCATTA
GTACTTTCAG TGGCATTCAA TTTACTCTTA GGTTATATCT ACGCATGGTT ACTCGATAAA
GTTCGTGGTC AGGAAATGAT GGTTGAAACT TACGTTGGTT ATTCAATAGT AGCATTCATG
TCAATTATGT GGCTTATTTT GCCATTCACT AATCCAGAAA TGATATGGGC AATAGGTGGA
AAAGGATTAA GATATACACT AACATTGCAG AATTACTTTG ATAAGATACT CAACAACTTT
CTAAGATTCC AAATAGGTAA AGATTTTTAC TTCCCAACGG GGCTTATACT CTTCTTTGCG
GCAAGTTGTT TCATAGTAAG CTTGTATTTC AAAACACGTC AAGGATTAGC GATTGATTTA
ACAGGTCAAA ATGAACTTTA TGGAATTAGC TCAGGTGTTA ACCCTAAAAA GGCCAGACGA
AACGCTGTGA TACTTTCAAC AATTTTAGGC GGTGTAGGAA TTCTTGTATA TGCACAAAGC
TATGGATTTC TACAACTCTA TCAAGCACCA CTCTTTATGA CTTTTCCAGC AGTTGCATCA
ATATTGATTG GTGGTGCATC GATAAAGAGG GCTACAATTA CTAATGTTGT TATAGGTACT
ATTGTATTCC AAACCCTTCT AACAGTCTCA TTGCCTGTTT TAAGCCAAGT TACACGGGGC
GACGTAACTG AAGTTATGAG ACTAATCGTG AGTAATGGAA TGATACTCTA TGCACTCACA
CGTTCCCCAA AGGAGGCGAA CTAA
 
Protein sequence
MNKIIELIKK TDIPTLVIIL FLIGLFILAA GTKMSITSLL SDSIVRVGMN GVLVLAMLPT 
IRAGIGPNFG LPVGIIGGLL GGLIVMQLQI TGFWGFLVAL VLSVAFNLLL GYIYAWLLDK
VRGQEMMVET YVGYSIVAFM SIMWLILPFT NPEMIWAIGG KGLRYTLTLQ NYFDKILNNF
LRFQIGKDFY FPTGLILFFA ASCFIVSLYF KTRQGLAIDL TGQNELYGIS SGVNPKKARR
NAVILSTILG GVGILVYAQS YGFLQLYQAP LFMTFPAVAS ILIGGASIKR ATITNVVIGT
IVFQTLLTVS LPVLSQVTRG DVTEVMRLIV SNGMILYALT RSPKEAN