Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0050 |
Symbol | |
ID | 5452990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 53304 |
End bp | 54347 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873800 |
Product | inner-membrane translocator |
Protein accession | YP_001409578 |
Protein GI | 154248753 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.617843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TCATAGAGTT AATAAAGAAG ACAGATATAC CTACCTTAGT AATAATTTTA TTTCTCATAG GTCTATTCAT CCTTGCAGCT GGAACAAAGA TGTCTATAAC TTCACTCCTC AGCGATTCGA TTGTTAGAGT CGGTATGAAT GGTGTGTTAG TGCTTGCAAT GCTACCAACT ATAAGAGCGG GAATAGGTCC AAACTTTGGT TTACCAGTCG GAATTATAGG TGGTCTCTTA GGTGGATTAA TTGTAATGCA ATTGCAAATA ACGGGATTTT GGGGATTCTT AGTTGCATTA GTACTTTCAG TGGCATTCAA TTTACTCTTA GGTTATATCT ACGCATGGTT ACTCGATAAA GTTCGTGGTC AGGAAATGAT GGTTGAAACT TACGTTGGTT ATTCAATAGT AGCATTCATG TCAATTATGT GGCTTATTTT GCCATTCACT AATCCAGAAA TGATATGGGC AATAGGTGGA AAAGGATTAA GATATACACT AACATTGCAG AATTACTTTG ATAAGATACT CAACAACTTT CTAAGATTCC AAATAGGTAA AGATTTTTAC TTCCCAACGG GGCTTATACT CTTCTTTGCG GCAAGTTGTT TCATAGTAAG CTTGTATTTC AAAACACGTC AAGGATTAGC GATTGATTTA ACAGGTCAAA ATGAACTTTA TGGAATTAGC TCAGGTGTTA ACCCTAAAAA GGCCAGACGA AACGCTGTGA TACTTTCAAC AATTTTAGGC GGTGTAGGAA TTCTTGTATA TGCACAAAGC TATGGATTTC TACAACTCTA TCAAGCACCA CTCTTTATGA CTTTTCCAGC AGTTGCATCA ATATTGATTG GTGGTGCATC GATAAAGAGG GCTACAATTA CTAATGTTGT TATAGGTACT ATTGTATTCC AAACCCTTCT AACAGTCTCA TTGCCTGTTT TAAGCCAAGT TACACGGGGC GACGTAACTG AAGTTATGAG ACTAATCGTG AGTAATGGAA TGATACTCTA TGCACTCACA CGTTCCCCAA AGGAGGCGAA CTAA
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Protein sequence | MNKIIELIKK TDIPTLVIIL FLIGLFILAA GTKMSITSLL SDSIVRVGMN GVLVLAMLPT IRAGIGPNFG LPVGIIGGLL GGLIVMQLQI TGFWGFLVAL VLSVAFNLLL GYIYAWLLDK VRGQEMMVET YVGYSIVAFM SIMWLILPFT NPEMIWAIGG KGLRYTLTLQ NYFDKILNNF LRFQIGKDFY FPTGLILFFA ASCFIVSLYF KTRQGLAIDL TGQNELYGIS SGVNPKKARR NAVILSTILG GVGILVYAQS YGFLQLYQAP LFMTFPAVAS ILIGGASIKR ATITNVVIGT IVFQTLLTVS LPVLSQVTRG DVTEVMRLIV SNGMILYALT RSPKEAN
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