Gene Xaut_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_5080 
Symbol 
ID5420473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp303241 
End bp304101 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID640873734 
ProductP-type conjugative transfer protein VirB9 
Protein accessionYP_001409514 
Protein GI154243941 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.674824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.494537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCGCG CTGCTCTCAT CTTCGTGGTG GCTTGGGCCT GCCTCGTCAC CCCTGCCAAT 
GCCCTGGAGA CGCCCAGCAG CGCACCCCAG GACAACCGGG TCCGCTTCGT CGACTACGAG
CCCTACAACA TCACCAAGAT CGTGGGCTCG CTGCGCTCCT CGGTCCAGGT CGAGTTCGCC
GAAGACGAGG AGATCGCTCA TGTGGCGCTC GGCAACACAG TGGCCTGGGA GGTGGCACCC
GCCGGAAACA TCCTGTTCCT AAAGCCGCGC GAGAACCAGC CGGTGACGAA CATCTCTGTG
GTGACGACAC GGCGCAATGG AGCGACCCGC AGCTATCAGA TGGAGCTCAC GGTGCGCGAC
GGCTCGGTGG CCTCGGGACA GCCCACCTAC TTCTATGTGA AGTATCGATA TCCCGCCGAC
GAGGCCGGGC GCCGGCGCCA GGAGGCAGCG GCAAGGGCTC AGGCCGCCCA GGCCGGCTAT
GCCGACAAGG TGCTCACCTT CCATGAGCAA TATGGCCCCC GCAACTGGCG CTACTCGGCG
CAGGGCTCGG CCGCGCTCGA GCCGGAGGCG GTCTACGACA ATGGCAAGCT GACCACCTTC
GCTTTCACCG GCAACCAGGA GATGCCGGCG ATCTACATGG AGAATTCCGA CGGCACGGAG
AGCCTGGTCC CGAAATCGGT CGAGGGCGAC CTGGTGCTCG TCCACGCCAT CAGCCGCAAG
TTCATCCTGC GACGTGGCGG CGATGTGCTC TGCATCTTCA ACGAAGCCTA TGACCGGGTT
GGGATCAACC CGGGCACCAA CACGACGTCT CCCTCGGTCG AGCGGATCGT GAAACCACAA
TCGGCGCCGA AGGCGCAATA G
 
Protein sequence
MKRAALIFVV AWACLVTPAN ALETPSSAPQ DNRVRFVDYE PYNITKIVGS LRSSVQVEFA 
EDEEIAHVAL GNTVAWEVAP AGNILFLKPR ENQPVTNISV VTTRRNGATR SYQMELTVRD
GSVASGQPTY FYVKYRYPAD EAGRRRQEAA ARAQAAQAGY ADKVLTFHEQ YGPRNWRYSA
QGSAALEPEA VYDNGKLTTF AFTGNQEMPA IYMENSDGTE SLVPKSVEGD LVLVHAISRK
FILRRGGDVL CIFNEAYDRV GINPGTNTTS PSVERIVKPQ SAPKAQ