Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_5080 |
Symbol | |
ID | 5420473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | - |
Start bp | 303241 |
End bp | 304101 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640873734 |
Product | P-type conjugative transfer protein VirB9 |
Protein accession | YP_001409514 |
Protein GI | 154243941 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.674824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.494537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCGCG CTGCTCTCAT CTTCGTGGTG GCTTGGGCCT GCCTCGTCAC CCCTGCCAAT GCCCTGGAGA CGCCCAGCAG CGCACCCCAG GACAACCGGG TCCGCTTCGT CGACTACGAG CCCTACAACA TCACCAAGAT CGTGGGCTCG CTGCGCTCCT CGGTCCAGGT CGAGTTCGCC GAAGACGAGG AGATCGCTCA TGTGGCGCTC GGCAACACAG TGGCCTGGGA GGTGGCACCC GCCGGAAACA TCCTGTTCCT AAAGCCGCGC GAGAACCAGC CGGTGACGAA CATCTCTGTG GTGACGACAC GGCGCAATGG AGCGACCCGC AGCTATCAGA TGGAGCTCAC GGTGCGCGAC GGCTCGGTGG CCTCGGGACA GCCCACCTAC TTCTATGTGA AGTATCGATA TCCCGCCGAC GAGGCCGGGC GCCGGCGCCA GGAGGCAGCG GCAAGGGCTC AGGCCGCCCA GGCCGGCTAT GCCGACAAGG TGCTCACCTT CCATGAGCAA TATGGCCCCC GCAACTGGCG CTACTCGGCG CAGGGCTCGG CCGCGCTCGA GCCGGAGGCG GTCTACGACA ATGGCAAGCT GACCACCTTC GCTTTCACCG GCAACCAGGA GATGCCGGCG ATCTACATGG AGAATTCCGA CGGCACGGAG AGCCTGGTCC CGAAATCGGT CGAGGGCGAC CTGGTGCTCG TCCACGCCAT CAGCCGCAAG TTCATCCTGC GACGTGGCGG CGATGTGCTC TGCATCTTCA ACGAAGCCTA TGACCGGGTT GGGATCAACC CGGGCACCAA CACGACGTCT CCCTCGGTCG AGCGGATCGT GAAACCACAA TCGGCGCCGA AGGCGCAATA G
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Protein sequence | MKRAALIFVV AWACLVTPAN ALETPSSAPQ DNRVRFVDYE PYNITKIVGS LRSSVQVEFA EDEEIAHVAL GNTVAWEVAP AGNILFLKPR ENQPVTNISV VTTRRNGATR SYQMELTVRD GSVASGQPTY FYVKYRYPAD EAGRRRQEAA ARAQAAQAGY ADKVLTFHEQ YGPRNWRYSA QGSAALEPEA VYDNGKLTTF AFTGNQEMPA IYMENSDGTE SLVPKSVEGD LVLVHAISRK FILRRGGDVL CIFNEAYDRV GINPGTNTTS PSVERIVKPQ SAPKAQ
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