| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4927 |
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| Symbol | |
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| ID | 5420412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | + |
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| Start bp | 148198 |
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| End bp | 149262 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640873587 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001409367 |
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| Protein GI | 154243794 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.72338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCC TCCTCATTCT CGTCGCCTGT TCCGCCCTCG CCGGCTGCAA CGAAGAGACC
TCGCCGGCTA AGCCTCCGCG GCCGGTCTTG TCGACCGTCG TCAGGCCCGT CGCCACCGGG
AACGTCGTGA CCGTCGGCAC CATCGAGCCC CAGTTCAAGA CGGAGCTGAG CTTTCGCTCG
CTGGGGCGGC TCGTCGCGCG GCCGGTCGGT GTCGGCGACC GGGTGGAGAA GGATCAGGTC
GTCGCGGCGA TTGATGATGC CGCGCTCAAG CTCGCCGTGC GCTCTGCCGT TGCCGAAGTC
GCCAATGCCC AGTCCCAGCT GGCCAACGCC TCCGGTGTGG AGGATCGTCA GCGTACGCTC
CTCGAAACCG CATCCACCAG CCGCGCCACG TTCGAGACGT CCGAGCAGGG GCGTGCCGCC
GCCCAGGCCT CGATGGCGAA GGCTCAGGCC AATCTCGTCA AGGCCCGCGA GCAGCTCGGC
TATGCGCAGC TGAAGGCGGA CTTCGCCGGT GTCGTCACGA CGGTGGGGGC CGAAGTCGGC
CAGGTGGTGG CGCCAGGCGA ACGGATCGTC ACCGTCGCGC GGCCAGATGT GCGCGAGGCC
GTGATCGACG TGGGCGAGGA TCTGGTGGGC GAGCTCAGGA TCGGAACCCC GTTCATCGTG
AGCCTGCGAC GCGATGCGTC CGTCACCGCC AACGGCAAGG TCCGGGAGAT CGCGCCTCAA
GCCGACGCGG CGACCCGCAC ACGCCGTATC CGTATCGGGC TCGACCAACC GCCGGACAGT
TTTCGGCTCG GCACGACGAT CACCGCCAAG CCGGCGGTCG TGCGCGCGAT CGCCCTCTTC
GTGCCGGCGG GCGCCGTCTT CGATCGCGAC GGGAAGACCT TCGTCTGGCG CGTCGAGGCG
TCCAGCCAGA CGGTCGTCCT GCAGCATGTC CAAGTCGCAG ACGTCAGCGA CGGGCGCAGA
CGCGTGATCT CAGGCGTCGA AGCCGGCATG CGAGTGGTCA CGGCCGGCAT CCACTCTCTT
TCCGACGGCC AAAAGGTCCG CATCGAGCAG GAAGCCCAGC CGTGA
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| Protein sequence | MPLLLILVAC SALAGCNEET SPAKPPRPVL STVVRPVATG NVVTVGTIEP QFKTELSFRS
LGRLVARPVG VGDRVEKDQV VAAIDDAALK LAVRSAVAEV ANAQSQLANA SGVEDRQRTL
LETASTSRAT FETSEQGRAA AQASMAKAQA NLVKAREQLG YAQLKADFAG VVTTVGAEVG
QVVAPGERIV TVARPDVREA VIDVGEDLVG ELRIGTPFIV SLRRDASVTA NGKVREIAPQ
ADAATRTRRI RIGLDQPPDS FRLGTTITAK PAVVRAIALF VPAGAVFDRD GKTFVWRVEA
SSQTVVLQHV QVADVSDGRR RVISGVEAGM RVVTAGIHSL SDGQKVRIEQ EAQP
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