| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4826 |
|---|
| Symbol | |
|---|
| ID | 5420574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009717 |
|---|
| Strand | - |
|---|
| Start bp | 32672 |
|---|
| End bp | 34099 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640873494 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001409274 |
|---|
| Protein GI | 154243701 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.836634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.338795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGT CCTCGATTCG CCCAGCGTTG GCGGCTCTCT CGTTGGCGCT TCTGCTCTCG
GGTTGCGCCA CCTTTTCTCC CGACGGCGGC ATGACCCTTG TAGCCGATCA AACCGTACGC
TCGGCTGCAG GAGAGCTCGG AGGAAATGTG GTCAAGATTT CCTCTGAGGA GGAGGCTGCG
CTGGCGGGTG CCCGCGTCGC TGCGCTCTTG TCCCAACCTC TTACCGCCCG CAGTGCCGTC
CAGGTCGCGC TCCTCAACAA TCGCGGCCTT CAGGCCGAAT ATAACGCTCT TGGAATTTCC
GAGGCGGCCT ATGTGGAGGC AAGCCTCCCA CCGAATCCTT CTTTCGGAGT GGAGCGGCTG
AACGGCGGCG GGGAGCTCGA CGTAGAGCGC CGTCTTGTTG CCAACCTGCT CACCTTGCTG
ACGCTTCCCG CGCGCAGCGA GATTGCAAAA AGCCAGTTCG AAGCAGCGCA GCAACGGGCT
ATCGAGGCCA CACTCCGCAC GGCAGCCGAA ACCCGACGCG CCTATTATCA GGTAGTGGCC
TCCCGGCAGA CGGTCGGGTT TTTGGAGCAG GCGCGGCTCT CCGCCGACGC CGCGGCTGAC
CTTACCCGCA AGCTCGGCGA GACCGGCACC GCCACCAAGC TGGACCAGGC TCGCGCCAGC
GCCTTCTACG CCGAGGTGTC AAACGAGCTC GCACAGGCGC GTATGCAAGC CGGCACGGCA
CGCGAGGCGC TCACCCGCAA GCTTGGTGTG TGGGGCGCCG ACGTCGGCTA CAAGCTTCCC
GGTCAACTCC CTGCGCTGCC TGGCCGCGTC CGTACCGTGC AGCAGGTGGA GGTGGACGCC
GTGCGCCGGC GCACTGATCT CATCGCCGCG CGGCTCGAAC TCGACGCCAT GGCGAAATCC
CTCGGCCTCA CGGAGGCAAC GCGCTTCGTC TCGCTGCTCG AAGGTGGATA TCGGGGCAAC
TACCAACGTG CGGATGGAGA GACCCTGCGT CCTCAGGGCT TCGAGCTCGA GGTCCAGATT
CCTATTTTCG ACTTTGGAGA GGTGAATGTG CGCCGTGCGA GGGAGACCTA CATGCAGGCA
GTGAACCTGC TCATGGAGAA GGCCGTGAAC GTCCGCTCCG AGGCACGGGC CGCCTACGTG
ACCTACCGGG CAAGCTACGA CATTGCCCGC CAATACCAGA TTAAAATTCT TCCCCTGCGC
AAGACCATCA ATGAGCAGGC GCTGCTGGAA TACAATGGAA TGCTCATCGA TGTCTTCGAA
CTTTTGACCA CCGCCCGAGA TAGCATCACG AGCAACGTCG CTGCGATCGG AGCGAGGCGT
GACTTCTTCC TCGCAGAGGT GGACTTCGAG ACGGCTATCC TCGGCGGGGG ATCGGGCAGT
GGAGCTGGAA CCGTCGTCGC ATCCGCAGCC CCCGGCGCTG GCGACTGA
|
|---|
| Protein sequence | MEASSIRPAL AALSLALLLS GCATFSPDGG MTLVADQTVR SAAGELGGNV VKISSEEEAA
LAGARVAALL SQPLTARSAV QVALLNNRGL QAEYNALGIS EAAYVEASLP PNPSFGVERL
NGGGELDVER RLVANLLTLL TLPARSEIAK SQFEAAQQRA IEATLRTAAE TRRAYYQVVA
SRQTVGFLEQ ARLSADAAAD LTRKLGETGT ATKLDQARAS AFYAEVSNEL AQARMQAGTA
REALTRKLGV WGADVGYKLP GQLPALPGRV RTVQQVEVDA VRRRTDLIAA RLELDAMAKS
LGLTEATRFV SLLEGGYRGN YQRADGETLR PQGFELEVQI PIFDFGEVNV RRARETYMQA
VNLLMEKAVN VRSEARAAYV TYRASYDIAR QYQIKILPLR KTINEQALLE YNGMLIDVFE
LLTTARDSIT SNVAAIGARR DFFLAEVDFE TAILGGGSGS GAGTVVASAA PGAGD
|
|---|
| |