Gene CCV52592_2065 details

Gene Information

• Locus tag: CCV52592_2065
• Symbol: rnc
• ID: 5407575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 1963379
• End bp: 1964050
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640873454
• Product: ribonuclease III
• Protein accession: YP_001409228
• Protein GI: 154173754
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGATT TAGAAAATTT ACAAAAGCTT TTGGGGTATG AGTTTGAAAA CACGAAGCTG 
CTAAACGAAG CCCTCACGCA CAAAAGCACG AAGCTGCCAT ATAGCAACGA ACGGCTAGAA 
TTCCTGGGCG ATGCGGTCAT GGATCTCATC GTCGGCGAAT ATCTTTTTAA AAAATTCAGC 
AAGACTAACG AGGGCGATAT GAGCAAGCTA AGAGCCGCAC TCGTAAATGA AAAAAGCTTT 
GCAAATATGG CTAGACACCT ACAAATCGGA GAATTTATCC ACCTTTCAAC AGCCGAGGCG 
AACAACGGCG GACGCGAAAA GGCAAGCCTT TTAAGCGACG CTTTCGAGGC GGTGATGGGG 
GCTGTTTATC TTGAAGCTGG GCTTGATAAA GTGCGTGAAA TAGCCGTGAG GTTGCTTGAA 
ATTTGCTATC CCAAGATCGA TTTTAGCCAC CTTGTAAAAG ACTACAAAAC AGCGCTTCAA 
GAGATCACGC AAGCAAGCCT GGGCACGACG CCTATATACG AGCTCGTGCG CTCGTTTGGA 
CCCGATCATA AGAAAGAATT TGAGATCGCG CTTTTATTAA ACGATAAAGA AATTTCGCGC 
GCCATCGCAA ATTCTAAAAA AGAGGCGCAG CAAATGGCGG CTAAGATCGC ACTTGAGAAG 
ATGAAAAAGT AG 

 

Protein sequence

MKDLENLQKL LGYEFENTKL LNEALTHKST KLPYSNERLE FLGDAVMDLI VGEYLFKKFS 
KTNEGDMSKL RAALVNEKSF ANMARHLQIG EFIHLSTAEA NNGGREKASL LSDAFEAVMG 
AVYLEAGLDK VREIAVRLLE ICYPKIDFSH LVKDYKTALQ EITQASLGTT PIYELVRSFG 
PDHKKEFEIA LLLNDKEISR AIANSKKEAQ QMAAKIALEK MKK