| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1815 |
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| Symbol | pipD |
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| ID | 5407675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 311307 |
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| End bp | 312551 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640871763 |
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| Product | pathogenicity island encoded protein: SPI3 |
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| Protein accession | YP_001407599 |
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| Protein GI | 154175187 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00139349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA TTCATAAATC AAGCGGCGTC ATCGACTGGC TGGATCAAAG ACTGGCATTT
ACCAAGCTGA TGAAAGTGCT CGTCAGCGAG TACTGGATAC CAAAAAACAT AAATTTCCTT
TGGGCGATGG GTGTTATCCT AACGACACTC TTTTTGTTAC TTATCGTTAC AGGCTTCTTA
CTTTTGATGT ATTATAAACC GGATGTAAAT TTAGCATTCG ACAGTGTGAA CTATACCATA
ATGCAAGAGG TCGAATACGG CTGGCTGTGG CGACATATAC ACGCGATCTC GGCATCGGTC
GTCTTTCTCA TAATGTACAT CCACCTTCTT ACCGGACTTT ACTACGGCTC ATATAAAAGA
GGCCGCGAGG TCATCTGGAT AAGCGGCATG GTGCTTTTCA TCTGTTTTTC AGCTGAGGCC
TTTAGCGGAT ATATGCTACC ATGGGGACAG ATGAGCTACT GGGCGGCGAC TGTGATCACC
CAGCTATTTG GCGGCGTGCC TGTCATCGGC GATGCACTGG TCGAGTGGAT ACGCGGAGAC
TACGCGGTAG GCGACTCCAC ACTGACACGA TTTTTCATGC TTCACGTGTG CTTGCTACCG
TTAGTCACGA TAGTGGTTTT AGTCATCCAC TTTTACTCGC TTCGCGTCCC GCACGTAAAT
AACCTAGACA GCGAGGAGAT CGACTTTGAG CTAGAAGCTA ACGAATACCT AAACGGCGAC
AGGAGCAAAG CCAAGGTCAT ACCGTTTTGG CCGGGCTTTT TGGCTAAAGA CTTTATGTAT
GTCTCGTTTT TCATGATATT TTTCATATAC CTTGTGTGCT ATCACTTCAA CTTTGCGATG
GATCCGATAA ATTTCGAGCC GGCAAACGCG CTCAAAACTC CGCCGCACAT CTATCCGGAG
TGGTATTTCC TCTGGCAATA TGAAATTTTA CGCGGATTTT TCTTTGACAT ACTTGGAATT
TCAGCCTACA ATATCGGTCT GATGGCATTT GCCTTTGCAG GAGTGGCGTT CATGCTGATC
CCGCTACTCG ATCGAAGCGA CGTCGTAGCT CCGGCACATC GCCGCCCGCT ATTTTTCGTA
TGGTTTTGGG TGCTAGTCAT CGACCTCATC GTGCTTTCTA TCTACGGCAA GCTACCTACC
GGCGGCATCA GCGACTGGAT AGGATTTTTC TCGTCGCTAC TATTTTTGTT TTTATTCATC
GTCGCCTTGC CTGCGATCAC TATACTTGAA AGAAAAAGGG GATAA
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| Protein sequence | MAQIHKSSGV IDWLDQRLAF TKLMKVLVSE YWIPKNINFL WAMGVILTTL FLLLIVTGFL
LLMYYKPDVN LAFDSVNYTI MQEVEYGWLW RHIHAISASV VFLIMYIHLL TGLYYGSYKR
GREVIWISGM VLFICFSAEA FSGYMLPWGQ MSYWAATVIT QLFGGVPVIG DALVEWIRGD
YAVGDSTLTR FFMLHVCLLP LVTIVVLVIH FYSLRVPHVN NLDSEEIDFE LEANEYLNGD
RSKAKVIPFW PGFLAKDFMY VSFFMIFFIY LVCYHFNFAM DPINFEPANA LKTPPHIYPE
WYFLWQYEIL RGFFFDILGI SAYNIGLMAF AFAGVAFMLI PLLDRSDVVA PAHRRPLFFV
WFWVLVIDLI VLSIYGKLPT GGISDWIGFF SSLLFLFLFI VALPAITILE RKRG
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