| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1583 |
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| Symbol | |
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| ID | 5406182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 720448 |
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| End bp | 722373 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640872166 |
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| Product | ribonuclease R |
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| Protein accession | YP_001407998 |
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| Protein GI | 154174138 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGAAT TTCTCACTGC CCTGCTAAGC GGCGTAAAAG AGAAAGAGAT AAACAGCGAG
AGCAAAGAGG TTTTACGAAA CCTCTTAAAT TTAGGCGCCG CGAGCTTACA TAAAGATAAA
TTTTACCTAA ACAACGGCTT TGTCTGCGGC AAACTAGACA TCAGTGCGAA CGGCACTGGC
TTTTTGATGC CGTTTGACAA GCGCTTCAAA CAAGACATCA TCATAGAAAA TAAAAATTTA
AACAACGCGC ACTTTGGCGA CATCGTGCTA GCAAAGCTGC TACCGCTTAA AAAAAAGCGT
CAAAGCGCTA AGGTCGTCAT GAGCCTAAAG CTAGCCAACG AAACCAGCGT CGTTTATACG
AAGCACTTTG GCGCGGCCGT ACTTGGCGTA AATTTAAAGA CAGGGCTATC TCTGGCGCTA
AAAGCCAGTC AAAAAAGCCT AAAAGCGCTT CCTATAGGGA CGCTTTTAAA GATAAATAAC
CTAAACAACG AAATAGTCGA GGTTTTAGGC AACATAAACG ATCCTTTCAG CGATGAGAAA
ATTTCACTCG CCCTATATAA CAAAAACGAT AAATTTAGCG ATGCTTGCGA GCTTGAGGCG
AGCTCTTGGG GCGACGAGGT CGATGCTAGC ATGTATCCAG ACCGCGTGGA TCTGCGAAAT
TTAGAATTTT ACACGATAGA TCCGATCGAT GCCAAGGACT TTGACGATGC GATATATTTT
GACGAACGAA ACCTCGAAAT TTACGTCGCG ATCGCCGATG TAAGCGAATA CGTGAGCGCC
TACTGCGCCA TAGACAGCGA GGCTAAAAAA CGCGGCTTTT CGATATATTT TCCGCACAAG
GCCATACCGA TGCTGCCGCG AGCGCTGAGC GAAAATATAT GCTCGCTTAA GCCAAACGTC
CCGCGCCTTG CGTTTTGCTT TAAAATTTCA CTTGATAGCG AGCTGAACGT GACGAAAGAG
GAGCTTTTCG AGGCGATCAT CGTTTCAAAA AAGCGCTTTA ACTACGATGA GGTCGATGAG
ATTTTAGAGG GCAGACGAAA GAGCGAAATT TCGTGGATAA AGCCGCTATT TGCGGTCACG
ACCAAACTTC GCAAAAAGCG CCTCGTGCAC GCATTTGACT TTCACACGCA AGAGCTCAGG
ATGAGCCTGG ATGAAAACGG CAAAATTTCA GCTACGCGCT ACGAGAGCGA CTCAGACTCG
CACAGGCTAG TCGAGGACTG CATGCTGCTG GCCAACAAAG CCGCCGCAAA ACGCATAAAA
AAGGGCGTCT TTAGAAATCA CGCCGCACCA GATCTAAAAA AAATAGACAA TCTCTTAAAC
GATCTGGCCG CGCTCGGGCT TGACTTCGTT TATGAAAACG ATCTTGCGAA TTTGATACGA
AAGATACAAG CCAAAGCCCA AGCTATCGGC AACCGCGAGG AGATAGACAA GCTCATCATA
AAAGCGCAGA AAAAGGCCGA ATATGCAAGT GAAAATTTAG GCCACTTCGG GCTTGGATTT
GACAGATATA CGCACTTTAC TAGCCCGATC AGACGCTACT CAGACCTCAT CTTACACCGC
CTTTTAAAGG CAAATTTAGC CAAAGACGAG AAGCTTTATA ACTTTTTGCT CCTAAATATC
GAAAGCACTT GCTCAAATTT GAGTGAGCTT GAAAGAGAGG CCGATAAGGT CGCGTTTGAT
TTCATGGATA GGAAATTTGC ACGCTGGGCG AGCGAAAACA TCGGCAAGCA GGTCATTTGC
TACATCAGTG AAAATCAAAA TATCCTAGTA GCAAAGCTGG ACGATGAGTT CGTGGGCGCT
AGAATTTTCA TCACTGGTTA TACCTGCGAG CTCTTGCAAG GGGTCTTAGT CGAGATCAAA
GAGGCCGACA TCGCCTCGGC AAAAATAATC GGCAAGGTCG TTCGCAAGCT CGAAAAGGAA
ATTTGA
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| Protein sequence | MKEFLTALLS GVKEKEINSE SKEVLRNLLN LGAASLHKDK FYLNNGFVCG KLDISANGTG
FLMPFDKRFK QDIIIENKNL NNAHFGDIVL AKLLPLKKKR QSAKVVMSLK LANETSVVYT
KHFGAAVLGV NLKTGLSLAL KASQKSLKAL PIGTLLKINN LNNEIVEVLG NINDPFSDEK
ISLALYNKND KFSDACELEA SSWGDEVDAS MYPDRVDLRN LEFYTIDPID AKDFDDAIYF
DERNLEIYVA IADVSEYVSA YCAIDSEAKK RGFSIYFPHK AIPMLPRALS ENICSLKPNV
PRLAFCFKIS LDSELNVTKE ELFEAIIVSK KRFNYDEVDE ILEGRRKSEI SWIKPLFAVT
TKLRKKRLVH AFDFHTQELR MSLDENGKIS ATRYESDSDS HRLVEDCMLL ANKAAAKRIK
KGVFRNHAAP DLKKIDNLLN DLAALGLDFV YENDLANLIR KIQAKAQAIG NREEIDKLII
KAQKKAEYAS ENLGHFGLGF DRYTHFTSPI RRYSDLILHR LLKANLAKDE KLYNFLLLNI
ESTCSNLSEL EREADKVAFD FMDRKFARWA SENIGKQVIC YISENQNILV AKLDDEFVGA
RIFITGYTCE LLQGVLVEIK EADIASAKII GKVVRKLEKE I
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