| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1507 |
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| Symbol | |
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| ID | 5406515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 145074 |
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| End bp | 146414 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640871604 |
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| Product | mate efflux family protein |
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| Protein accession | YP_001407445 |
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| Protein GI | 154174619 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00640866 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA CAAAAGAGCC GGTAAATCGG CTCATCATCA CTTTAGCCGT GCCTGCCGGG
ACGGCGATGA TGTTTAACAC GCTTTATAAC GTGACCGGGA CGTTTTTTGC CGGGACGATC
TCCACGTCCG CAGTCGCCGG ACTGTCGATG AGCTTTTTGC TCTATCTTAG CATCGTTGGC
ATAGGGCTTG GATTTGGCTC GTCGCTGACG GCACTCATTG GCAACTCGCT AGGCGCTGGA
CGCGAGTTTT TAGCTAGAAT TTACGCTGCA AAGGGCGTCA TCTTTGTGCT GATGTTTGCT
ATTGTTATGG GCACCTTTGG CTTTTTCATA GCTCCTAAGC TGCTTGTATT TTTGGGTGCA
AACGACGAAT TTTTAGACGA AGCGCTCGAA TATATAAGGG TGATTTTCCT CGCTTCGCCA
TTTTTTCTGC TCATAAAGTC GCTAAATGGC ATCCTAGTCG CGCTAGGCGA TACGAAAACT
TACAGGAATT GGCTATTTTA TGGCTTTTTC ATCAACATAG CCTTTTGTTT CATAAATGTT
AAAATTTTAG ATCTAGACGT TGGCGGCATA GCGTTCGCGA CGGCTAGCGT GCAGTTTTTA
GGAGCAATAT TTTTATTTGT GAAAGTCTAT AAAAGTGGCA TGATAAATTT CAGCTCTCTT
AAAATTTTCT TGCCTGACGC TAGGATCTAC GCTAAAATTT TAAAACAAGC CGTGCCTGCG
TGTCTAAACT ACCTCTCGAT GTCGCTTGGA GGGCTTGTGC TGTTAAAATT CATCAGCCTT
TACGGCACTA GCGCGGTCGC AGGGTATGGC ATCGCTCTTC GCATCGAGCA GATAGTCGTG
CTACCAACGA TCGGCATCGC TGCGGCCGTG CTTAGTGTGA TATCTCGAAA TTTCGGCGCT
CGCGAATACG CCCGCGTGCA AGAGTGCTAC AAAAACGCAC TTAGGATATT GCTTTATTAT
TGCCTCTTTG CCTGCGCTTT TTGCGTGCTT TGCGGAAGCT ACATCGTGCG GCTATTTGAC
GCGAACGCTC AGGTCGTTTA TGTCGCGCAG AGCTATTTGC TGGTAAATTC CTTCGCTTAC
ATAGGATATG GCGTCATAAA CGTCTCTGGA AGCGCACTTC AAGCGGTGAA AAGACCGAGC
ATGGTTTTCG TGCTAAACGC GATCAGGCAG CTTGTTTTGC AAATTTGCTT GTATTCGTTC
GTGGTTTTTG TCTTAAATGG CGACATCACA TATATCTGGC GCGCGATGTT TTTCAACGTC
TACCTCATCG CAGGCTGCTT TCTTTTGTGG ACGATCTTTG TTTTAAGGAG GGCTCATGCG
ACTTCAAGAC GAACTACGTG A
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| Protein sequence | MDLTKEPVNR LIITLAVPAG TAMMFNTLYN VTGTFFAGTI STSAVAGLSM SFLLYLSIVG
IGLGFGSSLT ALIGNSLGAG REFLARIYAA KGVIFVLMFA IVMGTFGFFI APKLLVFLGA
NDEFLDEALE YIRVIFLASP FFLLIKSLNG ILVALGDTKT YRNWLFYGFF INIAFCFINV
KILDLDVGGI AFATASVQFL GAIFLFVKVY KSGMINFSSL KIFLPDARIY AKILKQAVPA
CLNYLSMSLG GLVLLKFISL YGTSAVAGYG IALRIEQIVV LPTIGIAAAV LSVISRNFGA
REYARVQECY KNALRILLYY CLFACAFCVL CGSYIVRLFD ANAQVVYVAQ SYLLVNSFAY
IGYGVINVSG SALQAVKRPS MVFVLNAIRQ LVLQICLYSF VVFVLNGDIT YIWRAMFFNV
YLIAGCFLLW TIFVLRRAHA TSRRTT
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