Gene CCV52592_1363 details

Gene Information

• Locus tag: CCV52592_1363
• ID: 5406059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 797346
• End bp: 797933
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640872249
• Product: LysE family translocator protein
• Protein accession: YP_001408081
• Protein GI: 154175402
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00372502
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTTTTG TCATCACGTT TTTGCCTATC AGCCTGATGC CTGGCATCAA CATGACACTC 
GCGCTTAGCT TTGGCATGGC TCTTGGCTAC CGCCGCACTC TGCCGATGCT CGCGGGGCAG 
GTGTTTTCGC TCCTATTTAT CGCGGTTTTA TGTATATTTG GCATCGGCGC GCTACTTATC 
AAATACACTC TTGCTTTTAG CGTTTTTAAA ATTTGCAGTG GAATTTACCT CATCTACCTT 
GGTGTAAAGG GCTTTTTAAG GCGCGGCGGC GTCAGTGTCA AAAGCGTCAA AGGCGATAAA 
AGCGGCGTAG GGCTTTTTGT AAAAGGCGCA CTCATATCGC TGTCAAATCC AAACGCATGG 
ATATTTCTAG CCGCGATCTT GCCGGCATTT TTAAACAAAG CCGACCCGTT TGGCAGAGAT 
ATGTATCTGC TATTATTTTT GCTTTTTATC GTGGAGATTT TCGCGCTAAA CGTCTATGCG 
CTGGGCGGTA TGGCGTTTAA AAAACTGCTC GCAAACCACC TGCGGATTTT GGAGATCGTA 
TCTGCATTTT TGATGTGTTT TATCGGTGTT TGGATAATCG TGAATTAA 

 

Protein sequence

MLFVITFLPI SLMPGINMTL ALSFGMALGY RRTLPMLAGQ VFSLLFIAVL CIFGIGALLI 
KYTLAFSVFK ICSGIYLIYL GVKGFLRRGG VSVKSVKGDK SGVGLFVKGA LISLSNPNAW 
IFLAAILPAF LNKADPFGRD MYLLLFLLFI VEIFALNVYA LGGMAFKKLL ANHLRILEIV 
SAFLMCFIGV WIIVN