Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0887 |
Symbol | |
ID | 5406921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 266798 |
End bp | 267781 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640871724 |
Product | putative mannonate dehydratase |
Protein accession | YP_001407560 |
Protein GI | 154173799 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACTG TCGATATCCA CACGCATCTG CTTAGTAGCG AAGTGAAATT CGATAGAATT TTCGACAAAT TCGCCATAAC GCTTTTTGCC AAGAAATTCG GCCTAAACGC AAAAGAGCTT TACGAAAATC CTTACGAGTC CTATAAAGCT GGGCTCGTAA GAAACGTCAG GAGCTCGAAA TTTATGGACA AGATCGTGCT TTTTGGCGTA GATGCGAAGG TCAATGAAAA AGGCGAAATT TTGCACAAAG ACAAAACAGT CTGCGCCTCA AACGACGATG TTTTAGAAAT TTACGAGCAA AACAAAGACA TCATCGTGCC GTTTTTCTCC ATCAACCCTC TGCGCCCAAA CGCGCTTGAT CTCATCGATC ATTACTACGA AAAAGGCTTT AAGGGGGCGA AATTTTTGCA AAATTACTGG GGCGTGGATA CGAGAGAGGA TAGATTCACG CCATATTTTG AAAAGCTAAA GAAGCTTGAT CTGCCGCTTG TGGTGCATAT CGGCAGCGAA AGCTCGGTAA ATTCCGATAA AAGCTGCGAG CAGATAAGCA TGCTCTATCA TCCCCTAAAA ATAGGCGTCA AAACGATCTG CGCGCACATG GCGCTTGGCT ATGAGGGCAG GCATATCTTT AGATCGCTTT CCAAAAATCC TCGAAATTTC AACAAAGAAT ACTTCGCGCT TTTGGAGCTT TTAAAAACGC ACGATAACCT CTACGCCGAC GTTTCGGCGC TGTTAACGCC GATTCGCGCC AAGGTACTAA GGCATCTAAG CCAAGAGACG AGCGTGCATG AAAAGCTGCT TTACGGCTCG GATTTCCCGG TGCCATACTC CGCAATCTAC AACAGCTACG ATCTAAAATT TCGCCAAAGG CTAAAGCTTC ATAAAGAGCA AAATCCCTTC GATAGATACG CGAAAGGGAT CTTGTCGTAT TTTAGCGAAG ATAACGCGAT ATGGAGCAAC TATAAAAAGA TCATCGCGGA GTGA
|
Protein sequence | MKTVDIHTHL LSSEVKFDRI FDKFAITLFA KKFGLNAKEL YENPYESYKA GLVRNVRSSK FMDKIVLFGV DAKVNEKGEI LHKDKTVCAS NDDVLEIYEQ NKDIIVPFFS INPLRPNALD LIDHYYEKGF KGAKFLQNYW GVDTREDRFT PYFEKLKKLD LPLVVHIGSE SSVNSDKSCE QISMLYHPLK IGVKTICAHM ALGYEGRHIF RSLSKNPRNF NKEYFALLEL LKTHDNLYAD VSALLTPIRA KVLRHLSQET SVHEKLLYGS DFPVPYSAIY NSYDLKFRQR LKLHKEQNPF DRYAKGILSY FSEDNAIWSN YKKIIAE
|
| |