Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0875 |
Symbol | |
ID | 5407153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 256182 |
End bp | 257522 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640871711 |
Product | mate efflux family protein |
Protein accession | YP_001407547 |
Protein GI | 154174235 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGTCTC AAAGACTATT TTCCAATATC GACCTTGCAA AGCTGTTTTT GCCTATCGTG ATCGAGCAGT TTTTAGAATA CACCGTGGGG CTAGCCGGCT CCATAATGGC CGCTCACGTG AGCGAAAGCG CAGTCTCGGC GGTATCGCTC GTGGAATTCG TGATGGCGCT GTTTATCAGC GTGTTTTCGG CTCTTGCCAC CGGCGGTGCA GTCATCGCCG GGCAGTATCT TGGCGATAAA CAGATAGGAA ACGCCAGAAA CGTCACAGAT CAGCTTGTTT GGTTTAGCCT CGTATTTTCC GTGGCGGTGA TGATCTTGCT TTATCTCGTG AAAGATTTGA TGCTTGATTA CGTTTTTGGC GACATCACGG AGACGGTCAG GCAAAATTCC AGCCATTATT TTTTATTAGT GCTTCCTTCG CTGCCTTTTT TGGCGCTTTA TGCTTGCGGG GCGGCGATCT TTAGGACGAT GGGAAATTCC AAGCTGCCGA TGTATATCAT GCTCGTGATG AATATAACCA ACGTCATCTT GACAGCCATT TTTATCTATG CTTTTAAATT CGGCGTCTTT GGCATCGGCG CGGCCGCTTT GATAACTAGG GGGCTGGCTT GCTTCATCGT TATTTACTTG CTTTTAGACA TCAAGCTGAA GCTTCATATA AGAAAGACGC TAAGGCACAA ATTTGACCTT GCGATGATAA AAAGGATCTT GAGTATCGGC ATGCCGTATG GCTTTGAAAA CGGGATGTTT TACGTGGGTC GCATCATCGT TTTGAGCCTA GTTACTATGT TTGGCACGGC AGCTATCGCG GCAAATGCCG TTGGCGGGAC GATCGCGATG TTTCAGGTGC TACCTGGTAT GGCGATCGGC ATGGGTCTGA CGGTCGTCAT CTCGCGCTGC GTGGGTGCGA GCGACTACGA ACAGGCGAAA TTTTACACCA AGCGCATAAC CGCGATAGTC TATGTGGCAC AGTTTGTAAG CTGTGTCGTC GTTATATTGC TACTTGAGCC TATATTGAAT TTATACGCGC TTTCTAACGA GGCTCGCACA CTCACCGCGC AGATAATCTG GTGGCACGGC GCGATGACGA TCGTATTTTG GCCGTTGGCT TACACGCTAC CAGTCGTCTT TCGCGCTGCA GGAGACGCGA AATATCCGAT GATAGTCAGC ATCGTTTCGA TGTTTGTTTG CCGTGTGGCG CTAGCTTACA TTTTTAGTCT CATGCTTGGG CTTGGCATGA TGGGGACGTG GTTTGCGATG TTTGTTGATT GGATCGTGAA AGCGGCGATA TTTGTTTATA GGTATCTTAA CGGCAAATGG ACGGAATTTC GAGCGATTTA G
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Protein sequence | MPSQRLFSNI DLAKLFLPIV IEQFLEYTVG LAGSIMAAHV SESAVSAVSL VEFVMALFIS VFSALATGGA VIAGQYLGDK QIGNARNVTD QLVWFSLVFS VAVMILLYLV KDLMLDYVFG DITETVRQNS SHYFLLVLPS LPFLALYACG AAIFRTMGNS KLPMYIMLVM NITNVILTAI FIYAFKFGVF GIGAAALITR GLACFIVIYL LLDIKLKLHI RKTLRHKFDL AMIKRILSIG MPYGFENGMF YVGRIIVLSL VTMFGTAAIA ANAVGGTIAM FQVLPGMAIG MGLTVVISRC VGASDYEQAK FYTKRITAIV YVAQFVSCVV VILLLEPILN LYALSNEART LTAQIIWWHG AMTIVFWPLA YTLPVVFRAA GDAKYPMIVS IVSMFVCRVA LAYIFSLMLG LGMMGTWFAM FVDWIVKAAI FVYRYLNGKW TEFRAI
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