| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0774 |
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| Symbol | truD |
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| ID | 5407958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 1120874 |
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| End bp | 1121998 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640872562 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001408379 |
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| Protein GI | 154174417 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGG ACACCATTTT TAAGCCGCTT TACACGCTCA CGCACGCGCC GATAAACGCG
CATTTTAGCA AAAATGCCGA CGACTTCGTC GTGCGCGAGC TACCACTTTA CAGTTTTAGT
GGGCAGGGCG AGCACCTAAT CATCGAGATT GCCAAAAAGG ACATGACAAC GCAGGAGGCG
CTACGCGCGC TTAGCGACGC TACTGGCGTG AAGCTACGCG AATTTGGCTA CGCGGGGCTA
AAAGACAAGC AGGGCATGAC GACGCAGTTT GTCTCGATAC CGCGTAAATT TGAGGCGAAT
TTGGCAAATT TCAGCTACGA AAAGATAAAA ATTCTAAGCA CCGTCGCGCA TGAAAATAAG
CTTCGCGTCG GGCATCTGCG CGCAAATAAT TTTTTCATCC GCCTAAAAAA GGTCGTGCCA
AGCGAGGCGG CAAAGCTGGA AAATGCGATC AAAACGCTGG ATACATCGGG CTTTGCGAAC
TATTTTGGCT ATCAGAGATT TGGTAAATTT GGCGATAACG CCGCGAGCGG GCAGGAGCTG
CTAAAATCTG GCACGCTAAA TGGCAAGCGG CTGAAAAATC CGAAAATGAG CGAGTTTTTG
ATCTCGGCGT ATCAAAGCGA GCTTTTTAAC CGCTGGCTTA GCAAACGCGT TGAAATTTCG
CGCTTTGCAC AGGATTTTAG CCTCGCAGAG CTAGCTGAAA TTTATAAATT TATTCCGCGC
GAGGAGCTAA AAAGCTTAAA GGCGCAAAGG CAGTTTTTTA AGCTGATCGC GGGCGAAGTT
TTGGGGCACT ACCCGTATGG CAAATGCTTT TTGTGCGAGG ATTTGGACGC GGAGATAGAA
AGATTTGCTC GCCGTGACAT CACGAGCTGC GGACTCATCG TGGGAGCAAA AGCCTACGAG
GCGACCGGCA CGGCACGCGT GATCGAGGAT GAAGCCTTTG GTGAGGCGCG CGAATTTAAC
GCTAAAATGA GTGGCTCGCG GCGTTTTGCG TGGAGCTATC TTGAAAACGT GGAGTATAAA
TACATCCCTG AAAAGGCGCA TTTTACGGTG AGCTTTACGT TGCAAAAGGG GTCGTATGCG
ACGGTGGTGT TGGAAGAGAT TTTGCATAAA AATATCTTTG AGTGA
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| Protein sequence | MQEDTIFKPL YTLTHAPINA HFSKNADDFV VRELPLYSFS GQGEHLIIEI AKKDMTTQEA
LRALSDATGV KLREFGYAGL KDKQGMTTQF VSIPRKFEAN LANFSYEKIK ILSTVAHENK
LRVGHLRANN FFIRLKKVVP SEAAKLENAI KTLDTSGFAN YFGYQRFGKF GDNAASGQEL
LKSGTLNGKR LKNPKMSEFL ISAYQSELFN RWLSKRVEIS RFAQDFSLAE LAEIYKFIPR
EELKSLKAQR QFFKLIAGEV LGHYPYGKCF LCEDLDAEIE RFARRDITSC GLIVGAKAYE
ATGTARVIED EAFGEAREFN AKMSGSRRFA WSYLENVEYK YIPEKAHFTV SFTLQKGSYA
TVVLEEILHK NIFE
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