Gene CCV52592_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0323 
Symbol 
ID5406143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp1236035 
End bp1236574 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID640872680 
Productbeta-lactamase HcpA 
Protein accessionYP_001408497 
Protein GI154174909 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.742387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAAT TTATTTTTGC GGTGGTGGCT TTGGCTGTTT CGTTAAATTT TGCCCTTGCC 
TTTGAATTAT CGGCGCAAAA AGAGCTTGAA TATGGATTGG AAGCATCTTA TTATCAAGAC
TTGGCAAGAG CGTCAAAGCA CTTTGAGAGC GCTTGCAACA AAGGAAGTAT CAATGGGTGT
TCTTTCCTTG GTATCAGTTA TTACAACGGC GAGGGCGTGA GGCAAGACTA CAAAAAAGCG
ATAGAGATCT GGCAAATGAC ATGTGATAAA AAAGACGCCG TCGGCTGCGC TCAGCTTGGT
TTTGCATACA AGAGCGGCAA AGCTGTGAAG CAAGACTACA AAAAGGCAAT GGATCTTTAT
CAAAAGGCCT GCGATCTAGG GGGCGCTGAC GCTTGCTACG ATGTCGCTTC TTTATATCTT
GATGCAAAAG GCGTGGAGCA AAATTTCAAA ACAGCCAAAG AGTATTTTGG CAAGGCATGC
GATCTGGGCG ATCAGTTTGG CTGCGACGAC TACAAAAAGC TAAATGAAGC CGGATATTAA
 
Protein sequence
MRKFIFAVVA LAVSLNFALA FELSAQKELE YGLEASYYQD LARASKHFES ACNKGSINGC 
SFLGISYYNG EGVRQDYKKA IEIWQMTCDK KDAVGCAQLG FAYKSGKAVK QDYKKAMDLY
QKACDLGGAD ACYDVASLYL DAKGVEQNFK TAKEYFGKAC DLGDQFGCDD YKKLNEAGY