Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0077 |
Symbol | |
ID | 5406025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1190470 |
End bp | 1192404 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640872636 |
Product | lipoprotein-releasing system ATP-binding protein LolD |
Protein accession | YP_001408453 |
Protein GI | 154175482 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0439155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCA TCGATCTCAT AGAAGTCAGC AAAAAATTCG GTGCAAATGA AATTTTAAAC GAGGTAAATT TTAGCGTAAA TGAGCGCGAG CGTATCGCGA TCGTGGGTAA AAACGGCGGT GGCAAAAGCA CTCTGATGAA AATTTTATGC GGGGCTTACG AGCCTGATAG CGGGCGGGTC ATAACGCAAA ATAATATCAG CGTGGCGATG CTCGCTCAAA CGCCAAAATT TGATGAAAAT TTAAGCGTCA AAGAGGCAAT GAACCGCGAG CTAAAAGAAA TTTTTGACGC AAGAGAGCAA TACGCCGCCG TCCTTGAAGA ACTAGCCGCC CAACCCGAAA ACAAGGAGCT TCACGCGCAT TCAGACGAAC TGGTAAAATT TATCGAAGCA AAAGAGGGCT GGGACATCGA GCGAAAGATC GAGCGGGTGC TAGAAAAATT TAAGCTAAAA GAGTATGAAG ACAGGGCGGT TTGCTCGCTC AGTGGGGGCG AGATCCGCCG CGTGGCGCTT GGCGCGCTTA TTTTAAAACA CCCTGACGTG CTGCTGCTTG ACGAGCCGAC GAATCACCTT GACGTTTATA TGGTGAAATT TCTTGAAGAG ATGCTTAAAA ACTCGCGCCA GACGATAGTT TTCATCAGCC ACGATCGCTA TTTCATCGAC GTCCTCGCTA CGCGCACGGT CGAGATAGAG GAGGCGCAAA TACGCAGCTT TGAAGGCGGA TACGCGAACT ATCTAATGAG GAAACAAGAG CTTTTAGAAA GCCTTGCCAA GTCGCATGAG ACGCTACTAA AACAGCTAAA AAGCGAGGAG GAGTGGTTAC GCCGCGGCGT CAAAGCCCGT CTAAAACGCA ACGAAGGGCG CAAGGAGCGA GTGCTAGCCA TGCGCGAGGA AGCCAAGAAA AATCCGAGCG TGATCCGCCG TGTGCGCTTG GAGCTTGAAC GAGCGAGTAA AAATTTCAAC CAGACACAAA GCACCAACCG TAAAAAAATG CTCTTTGAGA TCAAAAATTT GAGCAAAAAT ATCGGCGGTA AGCTGCTTTT TGAAAAATTT GACGCGCGCG TGCTGCAAGG CGAGCGCATC GCTATCGTCG GACGAAACGG CAGCGGCAAG AGCACGCTAC TTAAAATTTT GCTTGGATTT GAGAGTGCGA GCGGTGGCGA GATAAAGCGT GGAGACGTGC GCGTGGGGTA TTTCGACCAG TCGCGAAGTG CGCTAAATGA CGAAAAGAGC CTCATCGAGA CCTTTTGCCC AAACGGCGGC GATCACGTCA TGGTGCGTGG GCGAAATATG CACGTTTTTG GCTATCTTAA AAATTTCCTT TTTCCAAAAG AATTCCTCGA TAAGCCTATC GGCGTGCTAA GTGGCGGCGA GAAAAACCGC GTCGCGCTCG CGCTACTTTT TACCAAAGAA TACGACATGC TCGTGCTTGA CGAGCCCACA AACGATCTTG ACATCGCGAC CATCAACATT TTAGAGGACT ACTTGCAAAG CTTCACTGGG GCGATCTTGC TCGTGAGTCA CGACCGCTAC TTCGTCGATA AGATCGCGCA CAAGCTTTGG GCTTTTGAAG GCACGAATAT TGACGTCTTG CACCAAGGAT ACAGCGTTTA TTTGGAGCTA GAAGACGAGC TAAGCGAGCT AGCTAAATTT GAAAGCGAGC TAAATTTAAG CGAGGGCGGC ACGAAGCAAA AGAGCAAAAC CGCCGCAAAA CTAAGCTACA AACAAACGCA AATTTTAGAA TTTCATCCAG AAAAAATCGC AAATTTAGAA GGCAAAATAG CCGAGCTTAA CGCGGCTTTA AGCGATCCTA AAATTTATCA AAAAATGGGG CTCACTGCAC TTTATAATGA CCTTGAAACG GCAAAAAAAG AGCTTGAAAA TTTAGAAAAC GAATACTTTG AAGTACTTGA AATCGCCGAA GGATTTGGAG CTTAG
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Protein sequence | MALIDLIEVS KKFGANEILN EVNFSVNERE RIAIVGKNGG GKSTLMKILC GAYEPDSGRV ITQNNISVAM LAQTPKFDEN LSVKEAMNRE LKEIFDAREQ YAAVLEELAA QPENKELHAH SDELVKFIEA KEGWDIERKI ERVLEKFKLK EYEDRAVCSL SGGEIRRVAL GALILKHPDV LLLDEPTNHL DVYMVKFLEE MLKNSRQTIV FISHDRYFID VLATRTVEIE EAQIRSFEGG YANYLMRKQE LLESLAKSHE TLLKQLKSEE EWLRRGVKAR LKRNEGRKER VLAMREEAKK NPSVIRRVRL ELERASKNFN QTQSTNRKKM LFEIKNLSKN IGGKLLFEKF DARVLQGERI AIVGRNGSGK STLLKILLGF ESASGGEIKR GDVRVGYFDQ SRSALNDEKS LIETFCPNGG DHVMVRGRNM HVFGYLKNFL FPKEFLDKPI GVLSGGEKNR VALALLFTKE YDMLVLDEPT NDLDIATINI LEDYLQSFTG AILLVSHDRY FVDKIAHKLW AFEGTNIDVL HQGYSVYLEL EDELSELAKF ESELNLSEGG TKQKSKTAAK LSYKQTQILE FHPEKIANLE GKIAELNAAL SDPKIYQKMG LTALYNDLET AKKELENLEN EYFEVLEIAE GFGA
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