Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1792 |
Symbol | |
ID | 5408840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1709377 |
End bp | 1709904 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640871458 |
Product | isochorismatase family protein |
Protein accession | YP_001407302 |
Protein GI | 154148287 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.1134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTT TAGTTTTTGT AATAGATATG GTAAACGGAT TTGTTGATAG CGGGGCTATG AGTGATTCTA AAATTGCAAC TATTACACCA AATATCAAAG AACAGATAGA ACATGCAAAC GGTGTGCATT TTATCTGCGA CAATCACGAC AAAGATGATT TGGAAATGAA AGTTTATCCG CCTCATTGTC TTGTAAATAC CGAAGAATGC AAAGTTGTAA ATACTTTAAG AGAATTTGCG GATTTTAAAA ATACAACATT TAAAAAATCT ACAAACGGCT TTTTTAATTT GGACAAAAAA CTGCTTGAAA ATTACGATGA ATTTGTAATT ACCGGATGTT GCACCGATAT TTGCGTATTA CAATTTGCAC TTTCACTTCG AGCATATTTA AATGAAAAAA ATATGGATAA AGATGTTATT GTTCCAAAAA GTTGTGTTGA AACTTTTGAT GCGCCAAATC ATGAACGCAC ATATTATAAT GAAATAGCTT TTAATTTAAT GCGAAATGCA GGAATTGCAG TAATATAA
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Protein sequence | MKSLVFVIDM VNGFVDSGAM SDSKIATITP NIKEQIEHAN GVHFICDNHD KDDLEMKVYP PHCLVNTEEC KVVNTLREFA DFKNTTFKKS TNGFFNLDKK LLENYDEFVI TGCCTDICVL QFALSLRAYL NEKNMDKDVI VPKSCVETFD APNHERTYYN EIAFNLMRNA GIAVI
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