Gene CHAB381_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1792 
Symbol 
ID5408840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1709377 
End bp1709904 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content31% 
IMG OID640871458 
Productisochorismatase family protein 
Protein accessionYP_001407302 
Protein GI154148287 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.1134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTT TAGTTTTTGT AATAGATATG GTAAACGGAT TTGTTGATAG CGGGGCTATG 
AGTGATTCTA AAATTGCAAC TATTACACCA AATATCAAAG AACAGATAGA ACATGCAAAC
GGTGTGCATT TTATCTGCGA CAATCACGAC AAAGATGATT TGGAAATGAA AGTTTATCCG
CCTCATTGTC TTGTAAATAC CGAAGAATGC AAAGTTGTAA ATACTTTAAG AGAATTTGCG
GATTTTAAAA ATACAACATT TAAAAAATCT ACAAACGGCT TTTTTAATTT GGACAAAAAA
CTGCTTGAAA ATTACGATGA ATTTGTAATT ACCGGATGTT GCACCGATAT TTGCGTATTA
CAATTTGCAC TTTCACTTCG AGCATATTTA AATGAAAAAA ATATGGATAA AGATGTTATT
GTTCCAAAAA GTTGTGTTGA AACTTTTGAT GCGCCAAATC ATGAACGCAC ATATTATAAT
GAAATAGCTT TTAATTTAAT GCGAAATGCA GGAATTGCAG TAATATAA
 
Protein sequence
MKSLVFVIDM VNGFVDSGAM SDSKIATITP NIKEQIEHAN GVHFICDNHD KDDLEMKVYP 
PHCLVNTEEC KVVNTLREFA DFKNTTFKKS TNGFFNLDKK LLENYDEFVI TGCCTDICVL
QFALSLRAYL NEKNMDKDVI VPKSCVETFD APNHERTYYN EIAFNLMRNA GIAVI