Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1688 |
Symbol | |
ID | 5408131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1606986 |
End bp | 1609187 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640871356 |
Product | recombination and DNA strand exchange inhibitor protein |
Protein accession | YP_001407200 |
Protein GI | 154149540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01069] MutS2 family protein [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAACG AAATCTTTTC AAGGCTTGAT TTAAGCGGAT ATTTGGAAAA ATTTTACAAT TATTTAGCGC GTGAAAAACC GCTTTTTTTG CAAGGAGACA GTAAAATAAA TTTTGAAAAA ATAGCTGAAA TTTCAAAATT TGATCTTTTG CTTTGTGAAA AAATAAAAAA TCTTGACGAC GAGCTTTTAA GGCTTTCAAA ACATACTACT TTACATATAA GTGAAATTTT TGAGTTCAGT AAAATAGTAA ATTATTTTTT GTATTTAAAA AAGCAAAATT TTGAAGGGTT GCTTGCAAGC TGGCTTCTTA AAATTGAAAT TCCATCTGAA ATTTTGGAAA TTTCAAATTT TTTTGATGAA AAAGGCGAGT TTAAGGATAG TGTCGATGAA AGATTTTATG CACTTCGTGA AGCCTATAAA ATCAAAAAAA GCCAAATTGA CGAGACGCTG AAAAGACTTA TTTACTCAAA AAATATAATT CCTTATCTTG CAGATACACA GATTCATTAC GTAAGCGACA CGGAGGCGCT TTTAGTCAGA GGCGGCTTTA ACCATGCTTT AAAAGGAAGG GTGGTGGCAA GAAGCGCGGG CGGTTATTTT TATGTGGCTC CTGATGCGAT TTTAAAACTA AAATCCGATC AAAGCGAAAT AATCGATACA AAAGAGCAGA TTGTTTTTGA GCATTGCAAA AAAATAAGCC AAATTTTTAC AAAAAACCTG CTGTTTTTGA AATTTATAAA TAACGCGTTT GATCAAATTG ATGCGCTGAT AGCAAGGGCT ATGTTCGCTA AAAACAACGA TTACGAGTTT GTTTTGGCGG ATAATTCGCA CGATATTATC ATAAAAGATT TCATTCATCC GGCTCTTAAA AATCCAAAAG CCGTAAGTGT GGAGTTTATC GGTAAAGTTT TACTGATTAC AGGTGTAAAT GCGGGCGGAA AAAGTATGCT TTTAAAATCT TTAATAACGG CTTCTTTACT TGCAAAATAC CTGCTTCCTA TGCATATCAA CCAGACTCAT TCCAAAATCG GTTCATTTAA AGAATTTGAG CTTATTATGC AAGATCCGCA AGATTCTAAA AACGATATTT CTACGTTTGC AGGACGTATG ATAAGTTTTT CACATCTTTT CGGGCGCAAA AATTTAATTA TCGGAGTCGA TGAAATCGAA CTTGGTACAG ATTTTGAAGA GGCAGCCAGT CTTTATAGCG TATTGATAAA AAATCTTATG AAAAACGATA TAAAAATGGT TATAACAACT CATCACAAAC GCCTTGCAAT GTTACTTTCA AAAGAATCAA GCGTAGAATT GATAGCGGCA CTTTACGATG AAAAAAACAG CCGTCCGAAA TATGAATTTT TAAAAGGTAT AGTCGGTAAA AGTTATGCGT TTGAAACCGC ATTACGATAT GGAATTCCGC AAAATTTAGT TATTGAAGCC AAAAAAACTT ACGGTGTCGA TAAGGAAAAT TTAAATGAAG CAATTTCAAA AGCTTTAAAT TTGGAACTTA ATCTTAAAAC CGAGCTTGAA ACAGTTCAGA AAAAAGAGCA AAAACTTGAC GCTTTAATCG AAAATTTAAA AGATCAAAAA GAAAAAAACG ATGAAATTTT CAAGGCTGAT GTTTCAAAAT TTCAGTTGGA ATTTTACAAC GCCATAAATA TGGCGAAAAA ATCAATTACG TTTGAAAACC AAAAAGATAG GCAAAGAGCC ATAAATACGG CAAACGAAAT GAAAAAAAAT ATAAAAATTC CAAAATTTGA AAACGCAGAT GAAAATTTAG AAGTCGGTGA ATGGGCAAAA TTTGGAAATG TAAAAGGCGA AATTGTTTCC ATAAAAGGAC GTGAAGCTAC AATTCTAAGC GAAGGAATAA AACTTCGCGT ACCGTTAGGC GATTTAAAAC GAAGTGTAAA ACCGCAAAAA GATAAGAAAA GTGTGCAAAT CAGCATTCAA AGTCCGCAAA ATGCGAGCGT AGTACTTGAT TTGCACGGAC TTCGCGCAGA TGAAGCAATC GAGCGTCTTG ACAGATTTAT CTCTCAATCT TTAGTGTTAG GACTTGACGA AATTATTGTA AAACATGGAA TCGGCACCGG AAAACTGGCT TACGCGGTCA GTAAGTTTTT AAAATCTCAT CCGAGCGTTA AGGAATTTAA AGATGCATCA CCAAATGAAG GCGGTTTCGG AAGTAAAATC ATAAAATTTT AA
|
Protein sequence | MMNEIFSRLD LSGYLEKFYN YLAREKPLFL QGDSKINFEK IAEISKFDLL LCEKIKNLDD ELLRLSKHTT LHISEIFEFS KIVNYFLYLK KQNFEGLLAS WLLKIEIPSE ILEISNFFDE KGEFKDSVDE RFYALREAYK IKKSQIDETL KRLIYSKNII PYLADTQIHY VSDTEALLVR GGFNHALKGR VVARSAGGYF YVAPDAILKL KSDQSEIIDT KEQIVFEHCK KISQIFTKNL LFLKFINNAF DQIDALIARA MFAKNNDYEF VLADNSHDII IKDFIHPALK NPKAVSVEFI GKVLLITGVN AGGKSMLLKS LITASLLAKY LLPMHINQTH SKIGSFKEFE LIMQDPQDSK NDISTFAGRM ISFSHLFGRK NLIIGVDEIE LGTDFEEAAS LYSVLIKNLM KNDIKMVITT HHKRLAMLLS KESSVELIAA LYDEKNSRPK YEFLKGIVGK SYAFETALRY GIPQNLVIEA KKTYGVDKEN LNEAISKALN LELNLKTELE TVQKKEQKLD ALIENLKDQK EKNDEIFKAD VSKFQLEFYN AINMAKKSIT FENQKDRQRA INTANEMKKN IKIPKFENAD ENLEVGEWAK FGNVKGEIVS IKGREATILS EGIKLRVPLG DLKRSVKPQK DKKSVQISIQ SPQNASVVLD LHGLRADEAI ERLDRFISQS LVLGLDEIIV KHGIGTGKLA YAVSKFLKSH PSVKEFKDAS PNEGGFGSKI IKF
|
| |