Gene CHAB381_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1688 
Symbol 
ID5408131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1606986 
End bp1609187 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content34% 
IMG OID640871356 
Productrecombination and DNA strand exchange inhibitor protein 
Protein accessionYP_001407200 
Protein GI154149540 
COG category[L] Replication, recombination and repair 
COG ID[COG1193] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01069] MutS2 family protein
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACG AAATCTTTTC AAGGCTTGAT TTAAGCGGAT ATTTGGAAAA ATTTTACAAT 
TATTTAGCGC GTGAAAAACC GCTTTTTTTG CAAGGAGACA GTAAAATAAA TTTTGAAAAA
ATAGCTGAAA TTTCAAAATT TGATCTTTTG CTTTGTGAAA AAATAAAAAA TCTTGACGAC
GAGCTTTTAA GGCTTTCAAA ACATACTACT TTACATATAA GTGAAATTTT TGAGTTCAGT
AAAATAGTAA ATTATTTTTT GTATTTAAAA AAGCAAAATT TTGAAGGGTT GCTTGCAAGC
TGGCTTCTTA AAATTGAAAT TCCATCTGAA ATTTTGGAAA TTTCAAATTT TTTTGATGAA
AAAGGCGAGT TTAAGGATAG TGTCGATGAA AGATTTTATG CACTTCGTGA AGCCTATAAA
ATCAAAAAAA GCCAAATTGA CGAGACGCTG AAAAGACTTA TTTACTCAAA AAATATAATT
CCTTATCTTG CAGATACACA GATTCATTAC GTAAGCGACA CGGAGGCGCT TTTAGTCAGA
GGCGGCTTTA ACCATGCTTT AAAAGGAAGG GTGGTGGCAA GAAGCGCGGG CGGTTATTTT
TATGTGGCTC CTGATGCGAT TTTAAAACTA AAATCCGATC AAAGCGAAAT AATCGATACA
AAAGAGCAGA TTGTTTTTGA GCATTGCAAA AAAATAAGCC AAATTTTTAC AAAAAACCTG
CTGTTTTTGA AATTTATAAA TAACGCGTTT GATCAAATTG ATGCGCTGAT AGCAAGGGCT
ATGTTCGCTA AAAACAACGA TTACGAGTTT GTTTTGGCGG ATAATTCGCA CGATATTATC
ATAAAAGATT TCATTCATCC GGCTCTTAAA AATCCAAAAG CCGTAAGTGT GGAGTTTATC
GGTAAAGTTT TACTGATTAC AGGTGTAAAT GCGGGCGGAA AAAGTATGCT TTTAAAATCT
TTAATAACGG CTTCTTTACT TGCAAAATAC CTGCTTCCTA TGCATATCAA CCAGACTCAT
TCCAAAATCG GTTCATTTAA AGAATTTGAG CTTATTATGC AAGATCCGCA AGATTCTAAA
AACGATATTT CTACGTTTGC AGGACGTATG ATAAGTTTTT CACATCTTTT CGGGCGCAAA
AATTTAATTA TCGGAGTCGA TGAAATCGAA CTTGGTACAG ATTTTGAAGA GGCAGCCAGT
CTTTATAGCG TATTGATAAA AAATCTTATG AAAAACGATA TAAAAATGGT TATAACAACT
CATCACAAAC GCCTTGCAAT GTTACTTTCA AAAGAATCAA GCGTAGAATT GATAGCGGCA
CTTTACGATG AAAAAAACAG CCGTCCGAAA TATGAATTTT TAAAAGGTAT AGTCGGTAAA
AGTTATGCGT TTGAAACCGC ATTACGATAT GGAATTCCGC AAAATTTAGT TATTGAAGCC
AAAAAAACTT ACGGTGTCGA TAAGGAAAAT TTAAATGAAG CAATTTCAAA AGCTTTAAAT
TTGGAACTTA ATCTTAAAAC CGAGCTTGAA ACAGTTCAGA AAAAAGAGCA AAAACTTGAC
GCTTTAATCG AAAATTTAAA AGATCAAAAA GAAAAAAACG ATGAAATTTT CAAGGCTGAT
GTTTCAAAAT TTCAGTTGGA ATTTTACAAC GCCATAAATA TGGCGAAAAA ATCAATTACG
TTTGAAAACC AAAAAGATAG GCAAAGAGCC ATAAATACGG CAAACGAAAT GAAAAAAAAT
ATAAAAATTC CAAAATTTGA AAACGCAGAT GAAAATTTAG AAGTCGGTGA ATGGGCAAAA
TTTGGAAATG TAAAAGGCGA AATTGTTTCC ATAAAAGGAC GTGAAGCTAC AATTCTAAGC
GAAGGAATAA AACTTCGCGT ACCGTTAGGC GATTTAAAAC GAAGTGTAAA ACCGCAAAAA
GATAAGAAAA GTGTGCAAAT CAGCATTCAA AGTCCGCAAA ATGCGAGCGT AGTACTTGAT
TTGCACGGAC TTCGCGCAGA TGAAGCAATC GAGCGTCTTG ACAGATTTAT CTCTCAATCT
TTAGTGTTAG GACTTGACGA AATTATTGTA AAACATGGAA TCGGCACCGG AAAACTGGCT
TACGCGGTCA GTAAGTTTTT AAAATCTCAT CCGAGCGTTA AGGAATTTAA AGATGCATCA
CCAAATGAAG GCGGTTTCGG AAGTAAAATC ATAAAATTTT AA
 
Protein sequence
MMNEIFSRLD LSGYLEKFYN YLAREKPLFL QGDSKINFEK IAEISKFDLL LCEKIKNLDD 
ELLRLSKHTT LHISEIFEFS KIVNYFLYLK KQNFEGLLAS WLLKIEIPSE ILEISNFFDE
KGEFKDSVDE RFYALREAYK IKKSQIDETL KRLIYSKNII PYLADTQIHY VSDTEALLVR
GGFNHALKGR VVARSAGGYF YVAPDAILKL KSDQSEIIDT KEQIVFEHCK KISQIFTKNL
LFLKFINNAF DQIDALIARA MFAKNNDYEF VLADNSHDII IKDFIHPALK NPKAVSVEFI
GKVLLITGVN AGGKSMLLKS LITASLLAKY LLPMHINQTH SKIGSFKEFE LIMQDPQDSK
NDISTFAGRM ISFSHLFGRK NLIIGVDEIE LGTDFEEAAS LYSVLIKNLM KNDIKMVITT
HHKRLAMLLS KESSVELIAA LYDEKNSRPK YEFLKGIVGK SYAFETALRY GIPQNLVIEA
KKTYGVDKEN LNEAISKALN LELNLKTELE TVQKKEQKLD ALIENLKDQK EKNDEIFKAD
VSKFQLEFYN AINMAKKSIT FENQKDRQRA INTANEMKKN IKIPKFENAD ENLEVGEWAK
FGNVKGEIVS IKGREATILS EGIKLRVPLG DLKRSVKPQK DKKSVQISIQ SPQNASVVLD
LHGLRADEAI ERLDRFISQS LVLGLDEIIV KHGIGTGKLA YAVSKFLKSH PSVKEFKDAS
PNEGGFGSKI IKF