Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1649 |
Symbol | aroE |
ID | 5408179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1571452 |
End bp | 1572240 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640871319 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001407172 |
Protein GI | 154148735 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAT TTGCAGTCTT CGGAAATCCG ATTTCACATT CGATTTCGCC AAGACTGCAT AATAACGCTA TTTTAGGCTT GAGTTTAGAC GCATTTTACG GTAGAGTTTT ACTAAATGAC GGCAAAGATT TGCGTGATAA TTTTTTAAAA CTTAAACTAA ATGCCGCAAA TATCACACTT CCATTTAAAA TAGACGCTTT TAGAATATCC GATTTCAAAA GTAAAGCTGC CGATAAAATA GGCTCAGTTA ATACACTTGT ATATAAAAAT GAAAAATTTT ACGGATACAA TACGGACGCG TTCGGATTTT GGCGCGCTGT AAGTAAAATC GGAAATTTCA AAAATGCAGT TATTTTAGGA GCTGGAGGAA CAACTCGCGC AATTTCATAT ATATTGCATG AAAATGGCGT TAAATTCGAT ATTTTAAATC GATCAGATAA AAGTAACGAA AATTTTGAAT GCGAAAATTT TTACACTTAC GAAAATTTTG ATACAAAAGA TTACGATTTG ATTATAAACT CAACTTCCGC GGGTTTAAAA GATGAAAATT TACCTGCTCC AAAAGAAATT TTAGATGAAA TTTTAAATAG AGCGAAATTG GCTTTTGATG TAATTTACGG AAAGGTTACA CCGTTTTTAA ATTTAGCGGA AAAATATGGC TTAAAAACTT CAGACGGCGC TCAAATGCTC GTATTTCAAG CAGTTTTAGC GTTAAATTTA TTTTATGACA ATACACTGAA CGAAACAAGA ATTTTAAAAT TTATGAACGA AGCTTTGAAA TTAAAATAA
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Protein sequence | MKKFAVFGNP ISHSISPRLH NNAILGLSLD AFYGRVLLND GKDLRDNFLK LKLNAANITL PFKIDAFRIS DFKSKAADKI GSVNTLVYKN EKFYGYNTDA FGFWRAVSKI GNFKNAVILG AGGTTRAISY ILHENGVKFD ILNRSDKSNE NFECENFYTY ENFDTKDYDL IINSTSAGLK DENLPAPKEI LDEILNRAKL AFDVIYGKVT PFLNLAEKYG LKTSDGAQML VFQAVLALNL FYDNTLNETR ILKFMNEALK LK
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