Gene CHAB381_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1649 
SymbolaroE 
ID5408179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1571452 
End bp1572240 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content31% 
IMG OID640871319 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001407172 
Protein GI154148735 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAT TTGCAGTCTT CGGAAATCCG ATTTCACATT CGATTTCGCC AAGACTGCAT 
AATAACGCTA TTTTAGGCTT GAGTTTAGAC GCATTTTACG GTAGAGTTTT ACTAAATGAC
GGCAAAGATT TGCGTGATAA TTTTTTAAAA CTTAAACTAA ATGCCGCAAA TATCACACTT
CCATTTAAAA TAGACGCTTT TAGAATATCC GATTTCAAAA GTAAAGCTGC CGATAAAATA
GGCTCAGTTA ATACACTTGT ATATAAAAAT GAAAAATTTT ACGGATACAA TACGGACGCG
TTCGGATTTT GGCGCGCTGT AAGTAAAATC GGAAATTTCA AAAATGCAGT TATTTTAGGA
GCTGGAGGAA CAACTCGCGC AATTTCATAT ATATTGCATG AAAATGGCGT TAAATTCGAT
ATTTTAAATC GATCAGATAA AAGTAACGAA AATTTTGAAT GCGAAAATTT TTACACTTAC
GAAAATTTTG ATACAAAAGA TTACGATTTG ATTATAAACT CAACTTCCGC GGGTTTAAAA
GATGAAAATT TACCTGCTCC AAAAGAAATT TTAGATGAAA TTTTAAATAG AGCGAAATTG
GCTTTTGATG TAATTTACGG AAAGGTTACA CCGTTTTTAA ATTTAGCGGA AAAATATGGC
TTAAAAACTT CAGACGGCGC TCAAATGCTC GTATTTCAAG CAGTTTTAGC GTTAAATTTA
TTTTATGACA ATACACTGAA CGAAACAAGA ATTTTAAAAT TTATGAACGA AGCTTTGAAA
TTAAAATAA
 
Protein sequence
MKKFAVFGNP ISHSISPRLH NNAILGLSLD AFYGRVLLND GKDLRDNFLK LKLNAANITL 
PFKIDAFRIS DFKSKAADKI GSVNTLVYKN EKFYGYNTDA FGFWRAVSKI GNFKNAVILG
AGGTTRAISY ILHENGVKFD ILNRSDKSNE NFECENFYTY ENFDTKDYDL IINSTSAGLK
DENLPAPKEI LDEILNRAKL AFDVIYGKVT PFLNLAEKYG LKTSDGAQML VFQAVLALNL
FYDNTLNETR ILKFMNEALK LK