Gene CHAB381_1613 details

Gene Information

• Locus tag: CHAB381_1613
• Symbol: rnc
• ID: 5409381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1536810
• End bp: 1537481
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640871283
• Product: ribonuclease III
• Protein accession: YP_001407136
• Protein GI: 154148336
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGAAA TAGAAAAAAT TTTAGGATAT AAATTTAAAA ATGAAAATCA TCTAAAACTT 
GCTCTGACGC ATAAAAGTTT CAAAGGCGCT CAAAATAACG AGCGACTGGA ATTTTTGGGA 
GATGCAGTTA TGGATTTGAT AGTTGCTGAA TATCTTTACG AAAAGTTTCG TCACACGCAA 
GAAGGCGATT TAAGCAAGCT TAGAGCAGCT CTTGTAAATG AAAAAAGCTT TGCGAAATTT 
GCAAGAAAAC TGAAAATCGG CGAAAATTTG TTTTTATCAC TTGGTGAAGA GCACAACGGT 
GGCAGAAAAA AAGATTCCAT TCTTTCAGAT GCGTTTGAAG CGATTTTTGG AGCAATTTAT 
CTGGAAAGCG GGCTGGAAGT TTGTAAAAGC CTTTCCATTA AAATTTTAGA GGAAATTTTT 
CCACAAATCG ATAAATCTTT ATATAAAGAT TTTAAAACCG AACTTCAAGA AATCACGCAG 
GCAAATTTTG CTTTGACGCC TACTTATAAG CTTTTAAGTG CGACAGGACC GGATCATAAA 
AAAGAGTTTG AAATGGCTGT TTTTTTTGAT GACAAAAAAA TCGCCGCCGC AAAAGGAAAA 
AGCAAAAAAG AAGCTGAACA AAAAGCCGCT AAAATCGCGA TTGAAATCGC TATCACGGAA 
AATATAAAAT GA 

 

Protein sequence

MHEIEKILGY KFKNENHLKL ALTHKSFKGA QNNERLEFLG DAVMDLIVAE YLYEKFRHTQ 
EGDLSKLRAA LVNEKSFAKF ARKLKIGENL FLSLGEEHNG GRKKDSILSD AFEAIFGAIY 
LESGLEVCKS LSIKILEEIF PQIDKSLYKD FKTELQEITQ ANFALTPTYK LLSATGPDHK 
KEFEMAVFFD DKKIAAAKGK SKKEAEQKAA KIAIEIAITE NIK