| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1442 |
|---|
| Symbol | |
|---|
| ID | 5408889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1385080 |
|---|
| End bp | 1386375 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640871115 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001406982 |
|---|
| Protein GI | 154148045 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00764479 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAT CTTTAAAATT TATCATTGTT ATTGTATTTT TGTTTATGGA TAGATCACTT
GCTATCACAT TTGATGAAAT TCTAAAGCAT GCCTTAAAAA ATTCTCCAGA TATAAAAATA
TCATCTCTTG ATATAAATTT AGCTTCAAAT GATTTGGATT ACGCATATTC TTATTTTTAT
CCTACCTTAT CATTGGCTTT AAACTCTGAA TATTCTAAAA GATTTGATGA CGGATATAAT
TTGGTTTATG TCGGCGAGAG CTCACTTGCC GGTTCTACTA CTTTTCAAAA CTCGGCTTCA
CTTATTTTAA GATATGATAT TTTAAAATTT GGAGCCGATT ATTATAGAAA AGAGAGCGCA
AAACAAAAAA TTGAAACAAT GAGTTTTAAA AAATGTGATG ATGAATTAAA TTTGGCGCTT
GAAATTTTGG AAAATTATAA AAAAGTTTTG ATTTTAAAAA ACAGTTTAAA TATAAATAGT
CAAAAGATTG ATATTTATGA AACTCTTTTG GATTATACAA AAAGATTAAA TAAAATAGGT
GAAAAATCAA AACTTGATGT CGCTGATATA AATATAAACT TATCTCAAAT AAAAGATGAA
ATTTTAAGCG CAAAAACACA AACAGCTTAC GCTTTAAATA TGATTTCAAT GCTTTCAAAT
TTAGATATAA ACGATGCTTT TGATTTCAAT GATTTTAATA TTCAAAAAAA TTATGAATTT
TTGGATTTTA AAGATACTTT TATGGCGATG CAAATAGTTT CTAAGATAAA AGAAGATGAA
CTAAATATCA AATCTCTTGA AAGCTCTTTT TATCCTACGA TATCTTTTTA TGCAAAATAT
GATTTTTATG GAGACGACAA AGACAGATAT TGGAAAAGTG TGCAAGATAG CAAAAAATAC
GGCTATAGAG TTGGAATTTC TTTTACTTGG GACATTTTTG ACGGCGGCAG AAAAAATGCA
CAGCTTAATA GAGCAAGACT GGAGAACGAA CAAAATAAAT TAAAATTAAA AGCCGCGAAT
CTTAAATACG ACAAAGAGAT TATGGATATG CGAAATTTCA AAAATAACGA AGAAGAAACT
TTGAAAAACT TGGAGCTTTT GAGTAAAGAA AGTAAAAGAT TAAAAGATAT GAGTTTATCA
TTAAATAAAA ACGGACAAAG CGATAAAATT ACAGTGCTAA ATCAAACAAT AAATGCACTA
AATAAAGAAC AAAGCCTAAA AGAAAATATC ATAAATGCAG GATACAATCT AACCAAAGCT
GATTTAATCG CAAAACAAAA AAGATGGTGC GAGTAA
|
|---|
| Protein sequence | MLKSLKFIIV IVFLFMDRSL AITFDEILKH ALKNSPDIKI SSLDINLASN DLDYAYSYFY
PTLSLALNSE YSKRFDDGYN LVYVGESSLA GSTTFQNSAS LILRYDILKF GADYYRKESA
KQKIETMSFK KCDDELNLAL EILENYKKVL ILKNSLNINS QKIDIYETLL DYTKRLNKIG
EKSKLDVADI NINLSQIKDE ILSAKTQTAY ALNMISMLSN LDINDAFDFN DFNIQKNYEF
LDFKDTFMAM QIVSKIKEDE LNIKSLESSF YPTISFYAKY DFYGDDKDRY WKSVQDSKKY
GYRVGISFTW DIFDGGRKNA QLNRARLENE QNKLKLKAAN LKYDKEIMDM RNFKNNEEET
LKNLELLSKE SKRLKDMSLS LNKNGQSDKI TVLNQTINAL NKEQSLKENI INAGYNLTKA
DLIAKQKRWC E
|
|---|
| |