| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1274 |
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| Symbol | trpB |
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| ID | 5409020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 1210334 |
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| End bp | 1211515 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640870953 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001406825 |
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| Protein GI | 154148171 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.545932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA AAGCGTATTA TGGGAAGTTT GGCGGACAAT TTGTCCCTGA AACAGCAATG
TTTGCGTTAG AAGAACTTGA ATATGCCTAC AAACATATAA CAAAAACAAA AGAATTTAAA
GATGAGTTGA ACTGGTTATT GCATGAATAT GTCGGACGCC CATCGCCACT TTATTATGCC
AAAAAACTTA GCAAATATTA CGGACATGAA ATTTACTTAA AACGCGAAGA TTTAAACCAT
ACCGGCGCAC ACAAAATAAA TAACGCTCTA GGACAAGCTT TGTTAGCTAA AAAAATGGGC
AAAACAAAGG TTATCGCTGA AACAGGAGCC GGACAGCACG GCGTGGCTAC AGCTACAGCC
GCTGCTTTAC TGGGACTTGA ATGCAATATT TATATGGGCG AAGTGGATGC AGCCCGTCAA
AGACTTAACA GATTTAGAAT GGAACTTTTA GGCGCAAAAG TTGTAGAAAT AAGATCAGGG
CTTAGAACAC TAAAAGAGGC CACAACAGCA GCAATTCAAG CTTGGGTAAA TGAAATAGAA
AATGTTTTTT ATGTAATAGG TTCAGTCGTC GGTCCTTATC CTTATCCTGA GATTGTAAAA
CACTTCCAAA GTGTAATAGG AAAAGAGACA AAAGCTCAAC TTAAAAAAAT GGGAATAAAA
GCCGATTATA TAGTAGCTTG CGTAGGCGGC GGAAGTAATG CTATGGGAAT TTTCAGCGCA
TTTTTAAAAG ATAAAAACGT TAATCTTTGC GGCGTTGAAG CAGGAGGTCT TGGAGCCGAT
ACTCCTTATA ATGCGGCAAC TCTTACAAAT GGTAAAGCTG GCATTATTCA CGGAATGAAA
ACAATTGTTT TACAAGATAA ATATGGCAGA ATTTTGCCTG TACACAGTAT TTCGGCAGGA
CTTGATTATC CTGGCGTAGG ACCTGAGCAT TCAAATCTAT TTGACACTGG ACGCGCACAC
TATGAAGCTG TAAGCGATGA TGAAGCTATA AATGCGCTTA AATTACTTTG CAAAACCGAA
GGAATCATCC CGGCAATCGA ATCGGCACAC GCTTTGGCAT ATTTGGATAA ACTTTGCCCG
AAACTTAAAG GTCATAAAAC TATAGTCGTA AATGTGAGTG GCAGAGGTGA TAAAGACATA
GATTCAATCA TAAACTATAA AAAAGGAACA ATTTATGGAT AA
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| Protein sequence | MNKKAYYGKF GGQFVPETAM FALEELEYAY KHITKTKEFK DELNWLLHEY VGRPSPLYYA
KKLSKYYGHE IYLKREDLNH TGAHKINNAL GQALLAKKMG KTKVIAETGA GQHGVATATA
AALLGLECNI YMGEVDAARQ RLNRFRMELL GAKVVEIRSG LRTLKEATTA AIQAWVNEIE
NVFYVIGSVV GPYPYPEIVK HFQSVIGKET KAQLKKMGIK ADYIVACVGG GSNAMGIFSA
FLKDKNVNLC GVEAGGLGAD TPYNAATLTN GKAGIIHGMK TIVLQDKYGR ILPVHSISAG
LDYPGVGPEH SNLFDTGRAH YEAVSDDEAI NALKLLCKTE GIIPAIESAH ALAYLDKLCP
KLKGHKTIVV NVSGRGDKDI DSIINYKKGT IYG
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