Gene CHAB381_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1189 
Symbol 
ID5409182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp1125624 
End bp1126325 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID640870871 
ProductRTX toxins and related Ca2+-binding protein 
Protein accessionYP_001406744 
Protein GI154149349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.730459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAG AATTAGTTGC GAAAGCCGAA CTCGACAGAG TTGAAAAAAT GCTTGAAGAA 
GCTGGTATTA TCAGAAATGG TGAAGTAAAT TTAGCCAAAT TGGCTATAAA TGATGCTAGT 
AAAACAATTG ATATATTGGC TGATGAACAT TTAGAAAAAA TGAAACACGG GAAAGGTGGC 
TTATTCCTAG TTACACAGGC TGGAAATATA GCAGTAGATT TAGCAAATGG GGAAGCTGGC 
GTAAAAACAG CTCTAAATTT AGCAATTGAT ACTGTGTTAT TTGTAGCACA AATTACGCCT 
ATGGGTAGAG CTTTTCAAGT GGCAGTAAAA GCCATAGATG GATTAAATAC TATTGCCTCC 
CACTTCGGCT ACGATATAGG AAGCCTAGCA GGAGAAATTT ACGATTGGGC TACAAAAGGA 
GATAAATATA AAGACTATAT TACACAAGAT GGATTTCTCC GTGTAGTTAT GGACGACGGC 
ACGGTATATA TGAGACCGCT TAAAGGAAGA TATGGTTTAG CAACTGGTAA TTATATGAAC 
GATGTATTAT TTGGTGGCGA TTGGAACGAC ACACTTCAAG GTGGTAATGG TAGCGACCTA 
CTCATCGGTG GCGACGGATT TGATACATAC AATGCAGGAA CACTTGACAT TATCCGTGAT 
AGCGACGGCA AAGGCAGAGT ATTTCTAGGA AGCTCTCATT AA
 
Protein sequence
MSRELVAKAE LDRVEKMLEE AGIIRNGEVN LAKLAINDAS KTIDILADEH LEKMKHGKGG 
LFLVTQAGNI AVDLANGEAG VKTALNLAID TVLFVAQITP MGRAFQVAVK AIDGLNTIAS 
HFGYDIGSLA GEIYDWATKG DKYKDYITQD GFLRVVMDDG TVYMRPLKGR YGLATGNYMN 
DVLFGGDWND TLQGGNGSDL LIGGDGFDTY NAGTLDIIRD SDGKGRVFLG SSH