Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1109 |
Symbol | truB |
ID | 5408346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1042450 |
End bp | 1043268 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870792 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001406665 |
Protein GI | 154148973 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC TTTTTGTCGC AAATAAGCCG ACAGGCATAA GTTCAAATCA TTTTCTAAAC ACTTTAAAAC GTAAATACGG CGTAAAAAAA GCTGGTTTTT CAGGCACTCT TGATCCGTTT GCAAGTGGAA ATTTGCTTAT AGCTTTTGGA AACTACACGC ATTTTTTTCG TTTTTTTGAT TTGGAACCTA AAATTTATGA AGCTACTATT TGGCTTGGAG CGAAAAGCGA AAGTTTGGAT AATCAAAATA TTGATAAAAT AGATATTCTA AAGCCTTTTG ACAAAAATTT ATTAGAAGAT GTGAGAGCTG AAATTTTAGG CGAAGTAAAA TACAATCCGC CAAAATTTTC AGCCAAAAAA ATAAACGGTA TGAGAGCTTA TAAACTAGCC AGAAAAGGTG AAGATTTTGA TGTTCCGACT CAAAATATGC AAATTTTTAA AAGTGAAATT TTAAATTATT CTCACCCGTT TTTAAATATT AAAATTTGGG TTTCAAAAGG CGCTTACGCA AGAAGTTATG CGCAAATTTT TGCCGAAAAG CTTGGTGTGA ATGCTACACT TTCCGCTTTA AAAAGGGTAA AAGAAGGAAG TTTTTGTTAT GAAGACGAAA AAGCCCTAAA TCCTTTGGAA TTCCTGACGT TAAAAGAAAA CTTTTATATT GGCGATGAGA GCGATATCGA GCTTGGCAAA ATTTTAAACG CACAAAATTT TAAAAACTCA AATGACGGAA AATATATCGT AAAAACCGCA AATTTTTACT CTATAATTGA AATTTCAAAC GGCGAAGTAA AATATCTGCT GAATAGGATT GAGATATGA
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Protein sequence | MNRLFVANKP TGISSNHFLN TLKRKYGVKK AGFSGTLDPF ASGNLLIAFG NYTHFFRFFD LEPKIYEATI WLGAKSESLD NQNIDKIDIL KPFDKNLLED VRAEILGEVK YNPPKFSAKK INGMRAYKLA RKGEDFDVPT QNMQIFKSEI LNYSHPFLNI KIWVSKGAYA RSYAQIFAEK LGVNATLSAL KRVKEGSFCY EDEKALNPLE FLTLKENFYI GDESDIELGK ILNAQNFKNS NDGKYIVKTA NFYSIIEISN GEVKYLLNRI EI
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