| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1029 |
|---|
| Symbol | |
|---|
| ID | 5408052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 968118 |
|---|
| End bp | 969197 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640870715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001406588 |
|---|
| Protein GI | 154148831 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.148113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG ATTTTTGTAA AAAAGGTATA GAATTGAGAC TTGGTGTAAA TGAAACAGTT
GATTTGATAG AAAATGCGCC GTTTTGTGAG CTTGGCGCTA TGGCATTTGC CAAAAAAAGA
GAACTCCACT CTGATAAAAT CACTACTTTT ATAGTAGATA GAAATATAAA TTATACAAAT
ATATGCTTTG TGGATTGCAA ATTTTGCGCT TTTTGCAGAC ACGTAAATGA TGATGAAGCT
TATATTTTGA GTTTTGAAGA AATTAGTAAA AAAATCGATG AACTTTTGGA AATTGGCGGC
ACACAAATTC TTTTTCAAGG TGGCGTGCAT CCGAAACTAA AAATTGATTA TTATGAAAAT
TTGGTTGATT TTATACATAA AAAATATCCG CAAATAACTA TTCACGGTTT TTCTGCCATT
GAGATTGATT ATATCGCAAA AGTTAGTCAT ATTTCGGCTA TTGAAGTTTT AAAAAGGCTT
CAAAACAAAG GACTTTACAG TATTCCAGGA GCCGGAGCGG AGATTTTGAG CGATAGAGTT
CGAGATATTA TCGCACCTAA AAAATGTTCA AGCGGACGTT GGCTTGAAAT ACATGCTCTA
GCACATTCAA TAGGTATGAA AACTACAGCT ACGCAGATGT TCGGCACTGT CGAAACTACG
CGTGAAATTG TGGAGCATTG GGAAAAAATC AGAGATTTAC AGGATAAAAC GGGCGGGTTT
CGCGCATTTA TTTTATGGAG CTTCCAAAGC GAGCATACAA AACTTATAAA AGAGCACCCG
GAAATTTCAA AACAAAGTTC AAATCGTTAT TTAAGACTGG TTGCGGCTGC GAGACTTTTT
TTAGATAATT TTAAAAATAT TCAAAGTTCT TGGGTCACAC AAGGCTCATA TATAGGGCAG
TTGGCTTTAA AATTCGGTGC AAACGATCTT GGCTCCACCA TGATGGAAGA AAACGTCGTA
AAAGCGGCCG GAGCAAATTT CAGAATGAGT CAAAACGAAA TGGTAACTCT TATAAAAGAA
ATAGACGAAA TTCCTGCCAA ACGCAATACA AATTATGATA TATTGGAAAT CTACAAATGA
|
|---|
| Protein sequence | MQTDFCKKGI ELRLGVNETV DLIENAPFCE LGAMAFAKKR ELHSDKITTF IVDRNINYTN
ICFVDCKFCA FCRHVNDDEA YILSFEEISK KIDELLEIGG TQILFQGGVH PKLKIDYYEN
LVDFIHKKYP QITIHGFSAI EIDYIAKVSH ISAIEVLKRL QNKGLYSIPG AGAEILSDRV
RDIIAPKKCS SGRWLEIHAL AHSIGMKTTA TQMFGTVETT REIVEHWEKI RDLQDKTGGF
RAFILWSFQS EHTKLIKEHP EISKQSSNRY LRLVAAARLF LDNFKNIQSS WVTQGSYIGQ
LALKFGANDL GSTMMEENVV KAAGANFRMS QNEMVTLIKE IDEIPAKRNT NYDILEIYK
|
|---|
| |