Gene CHAB381_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0838 
Symbol 
ID5409417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp776581 
End bp777225 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content33% 
IMG OID640870527 
Productlipoprotein-releasing system ATP-binding protein LolD 
Protein accessionYP_001406402 
Protein GI154148688 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.19069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTT TAAGGGGCGT AAATTTAACC CATGCGTTTG AATATACGCT CTTTGAAAAT 
ATAAATATCA CTCTTCACAA CCGCGAAAGT ATAGCAATTC TTGGCGTCAG CGGTTGTGGA 
AAATCGACTA TGCTTCATAT TTTATCTACA CTTTTAAAAC CGAACTCAGG CGAAGTTTTT 
TATAATGAAC GCGAAATATA TTCACTCAGT TCTGATGAAC GCCTTAAAAT CAGAAGAAAT 
GATTTTGGTA TAATTTTTCA ATCACATTAC TTATTTAAAG GTTTTTCCGC CTACGAAAAC 
ATAGAGTTGG CTGCAAAACT TGTAAATAAA AAAATTGATA ATGAAATTTT GGATAAACTT 
CAAATTTCAC AAATTTTAAA GCAAAAAATC GGCGAACTTT CAGGCGGACA ACAACAACGC 
ATATCAATCG CAAGAGTGCT TCACAAAAAC CCAAATATAA TTTTTGCGGA CGAACCGACC 
GGAAATCTTG ATAAGGATAC TGCAAATGAT GTATTTGACG TATTGTTCGA TTATATCAAC 
AAAAAAGATG GCGGTTTGAT TTTAGTTACT CATGATGAAA ATTTGGCACA AAAATGCTCC 
AGCGTTTATC GCTTGGTTGA CAAAAAGCTA ATAAAAATCA GATAA
 
Protein sequence
MELLRGVNLT HAFEYTLFEN INITLHNRES IAILGVSGCG KSTMLHILST LLKPNSGEVF 
YNEREIYSLS SDERLKIRRN DFGIIFQSHY LFKGFSAYEN IELAAKLVNK KIDNEILDKL 
QISQILKQKI GELSGGQQQR ISIARVLHKN PNIIFADEPT GNLDKDTAND VFDVLFDYIN 
KKDGGLILVT HDENLAQKCS SVYRLVDKKL IKIR