| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0837 |
|---|
| Symbol | |
|---|
| ID | 5408669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 775146 |
|---|
| End bp | 775844 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640870525 |
|---|
| Product | N- methylation |
|---|
| Protein accession | YP_001406400 |
|---|
| Protein GI | 154148250 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.288173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CTTTTACAAT GATTGAACTT ATATTTATCA TCGTGGTAGT CGGAATTTTA
GCAGCTGTTG CGATTCCTAG GATTGATCGC GATAATTTGA TTGAACTTGT CGATCAGGTT
ACTACACATA TACGATATAC TCAACAACTT GCAATGATGG ATAATGTATA TGACGGCTCT
GATGAACATT GGTATAGAGG GTATTGGAGA ATTCAGTTTA GCGACTCGGC AGATGGTGGG
GATGGCTGGA AATATTCTGT TTATAAAGAT TTACCTGGTT ATAGCGGAAA TTTAAATAGC
GAAAGAGAAG TTGCTCGCGA TCCGCAAAAT GAACAAAGAT TTCTTACTTC AGGAGCAAGC
GGTTTTTCGG CAAATACAGA TTCAAAGAAA ATGAATAAAA AATTAAATCT AAAAAATACC
TATGATATAC AAAAAATAGA TTTTGATAAA AACTGTGGAG GTCAAACTAT TGCATTTGAC
AGTAAAGGTC GTCCGCACGG TGCGCCGCAA AATGCAAAGA ATCCTTACGA TAAGGTGTTA
CATACACCAT GTATAATAAC TTTTACAGAT TCGGGCGGCA GATCTATACA GATTGCAGTT
CAGCCTGAAA CAGGTTTTAT CAGCGATAAC CGTGCAGAAG CAATTGAAAA AAATTGGAAA
GCCGGAAACT TTAAAAAATT TGATAATAAA GAATTTTAA
|
|---|
| Protein sequence | MKKAFTMIEL IFIIVVVGIL AAVAIPRIDR DNLIELVDQV TTHIRYTQQL AMMDNVYDGS
DEHWYRGYWR IQFSDSADGG DGWKYSVYKD LPGYSGNLNS EREVARDPQN EQRFLTSGAS
GFSANTDSKK MNKKLNLKNT YDIQKIDFDK NCGGQTIAFD SKGRPHGAPQ NAKNPYDKVL
HTPCIITFTD SGGRSIQIAV QPETGFISDN RAEAIEKNWK AGNFKKFDNK EF
|
|---|
| |