Gene CHAB381_0559 details

Gene Information

• Locus tag: CHAB381_0559
• Symbol: rimM
• ID: 5408915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 508107
• End bp: 508637
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640870264
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_001406147
• Protein GI: 154147973
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.970702
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAG ACGATATGCT TGAGGTTGCA CTTTTAGGTA AAACGATTGG CCTAAAAGGT 
GCAATAAAGC TTCATAATAG AAGTGATTTT CCTTCACAAT TCAAAAAAGG TGCAAAATTT 
TATTTAACGG ATGGGGAAAT TTTAGAAATT TTAAGTTTTA ATAAAACAAA TTTCGTTGCC 
GTATTTAAAA ACTATGAAAA TATTGAATGC GCCGCTAAAT TGACAAATAA AATTTTATAT 
CAAAGCAAAG AAATTACTAA AAAAACCTGT AAACTTGGAA AAGATGAATT TTTCTATTTT 
GAAATTTTAG GGTTGGAAGT ATTTGAAAAT GAAGAAAAAT TAGGCAAAGT AGCTGATATT 
TTTGAGGCCG GAAATTTTGT ATTTGAGATT GCGACCGATG AAAAATTAAT TAAAAAAGGT 
TTTCCTAAAA TATTTTATTT GCCATATACC GATCATTTTA TAGATAAAAT TTCTATTGAA 
GAGGGCAAAA TTTTCAGTCG TTTCGGTTTT GAAATTTTGC AAAATTCGTG A 

 

Protein sequence

MLKDDMLEVA LLGKTIGLKG AIKLHNRSDF PSQFKKGAKF YLTDGEILEI LSFNKTNFVA 
VFKNYENIEC AAKLTNKILY QSKEITKKTC KLGKDEFFYF EILGLEVFEN EEKLGKVADI 
FEAGNFVFEI ATDEKLIKKG FPKIFYLPYT DHFIDKISIE EGKIFSRFGF EILQNS