| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0556 |
|---|
| Symbol | ffh |
|---|
| ID | 5408986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 506246 |
|---|
| End bp | 507580 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640870261 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_001406144 |
|---|
| Protein GI | 154147877 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.521586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGAAA CTATTAGCGA ATCTTTTAGA GCTGCTGTAA ATAAACTTCG TATGATTGAT
GACGAAAAAG CTTTAAAAAA TGCACTCAAT ACTCTTAAAA AAGCACTTTT AAAAGCGGAT
GTACATCATA AAGTAACAAA AGATTTTTTA ACATTAGTAG AAAACGATAT GAAATCCGGC
GTGGTTGGTC AAAAACAATT TTTGGATTCA ATAAAAAATA ATCTCACCAC AGTCCTTACA
GCTCCTGGGA ATCAAGGTTT TGTGTTTGCA TCTCAAAATC CTACAGTAGT ACTTATGGCT
GGACTTCAAG GTAGCGGAAA GACTACAACT ACAGTTAAAC TTGCAAATTA TTTAAAACTT
CGCAAAAAAA AGGTATTAAT AGCAGCTTGT GATTTACAAA GATTAGCTGC TGTAGAGCAA
CTTCGTCAAC TTTGTGAAGC AAATGAAATT GAACTTTTTT ATATAGAAAA TGAAAAAAAT
CCTAAAAAAG TAGCAAAAGA AGCTATCTTA AAAGCGAAAA AAGGTCTTTA TGATGTGCTT
TTAATAGATA CTGCTGGAAG GCTTGCTATT GACGAAGAGC TTATGGATGA GCTGAAAGAA
ATTAAAAAAA TCAGCAATCC TGATGAAATT TTTTATGTAG CTGATGCTAT GAGCGGACAG
GATGGTGTCA GAAGTGCTGC AAATTTTAAC GAAAAGCTTG GAATTTCAGG CGTAATCTTA
TCAAAATTTG ATGCTGATAC AAAAGGCGGA GTGGCTCTCG GTATAGCTAA ACAATTAAAT
ATTCCGCTTA GATTTATCGG TACCGGTGAA AAGATTGCAG ATTTTGAAGG TTTTATACCT
GAGCGTATAG TCAGCCGAAT AATGGGCGAA GGCGATTTGG CTACTTTAGT CGAAAAAACC
AGTGCTGTTT TTGATGAAAA AGATGTAAAA AAAATCGGTA AAAAAATTCG CAAAGGAAAT
TTTAATTTTA ATGATTTTAT AAATCAACTT GAAAGTGTTA AAAAACTTGG CAACATGAAA
AATCTTATCG GCATGATTCC TGGAATGAAT GGAATCGCTA ATCAAATAAA AGATATGGAT
CTTGAAAATT CAAAAGAAAT AATTCACATA AAAGCAATGA TAAATTCTAT GACTCCGGAT
GAGCGTGAAG ATCCGAACCT TTTAAATAAT GCTAGAAAAA GAAGAATTGC AAGTGGCGCC
GGACTTTCGC AAGTTGAGGT TAATAAATTT TTGAAGCAAT TTTTAAATGC AAGCAAAATT
GCAAAAAGAT TTAGTGGAAA AGGCGGAATG CAAAATCTCT CAGCAATGCT TCATAAACAA
AACTTCCCAA GATAG
|
|---|
| Protein sequence | MFETISESFR AAVNKLRMID DEKALKNALN TLKKALLKAD VHHKVTKDFL TLVENDMKSG
VVGQKQFLDS IKNNLTTVLT APGNQGFVFA SQNPTVVLMA GLQGSGKTTT TVKLANYLKL
RKKKVLIAAC DLQRLAAVEQ LRQLCEANEI ELFYIENEKN PKKVAKEAIL KAKKGLYDVL
LIDTAGRLAI DEELMDELKE IKKISNPDEI FYVADAMSGQ DGVRSAANFN EKLGISGVIL
SKFDADTKGG VALGIAKQLN IPLRFIGTGE KIADFEGFIP ERIVSRIMGE GDLATLVEKT
SAVFDEKDVK KIGKKIRKGN FNFNDFINQL ESVKKLGNMK NLIGMIPGMN GIANQIKDMD
LENSKEIIHI KAMINSMTPD EREDPNLLNN ARKRRIASGA GLSQVEVNKF LKQFLNASKI
AKRFSGKGGM QNLSAMLHKQ NFPR
|
|---|
| |