| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0372 |
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| Symbol | |
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| ID | 5409072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 340167 |
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| End bp | 342092 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640870082 |
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| Product | ribonuclease R |
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| Protein accession | YP_001405973 |
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| Protein GI | 154148680 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAT TTTTAAAGTC TTTCAACATA GGCGTCAGCA AAAATTCGCT TAGCGCAAAA
GAGCAGGAGA TTACAAGAAA TTTGCTTAAT GTGGGCGCAA TCAGCGAATA TAAAGGAAAA
TATTATCAAA ATGACGGATT TGTGTTTGGA AAACTTGATA TTTCATCTAA TGGAACCGGT
TATTTAAGCG CATTTGACGA CAAATTCGAA AGCGATTTAA TAATAGAAAA CAAACACATA
AACGGTGCAC ATTTTGGCGA TACGGTTTTA GCGAAAATTA TCAGTAAAAA AAAGGCCAGA
ACTCATGCAA AAGTGCTTAT GTGTGTGTTT CCTGCATTTG CGACAAGCGT TGTTTATACT
AAAAAATTCG GCCGAGAAAT TTTAGGCGTA AATATAAAAA CCGAAGTTGC AACCATGTTA
AGAGCGACAC AAAAATCGCT TAAAGCATTG CCTGAATTTA CTCTTTTAAA AATTGATAAT
CTAAAAAATG AAATAGTTGA GGTTTTAGGA AATTTAAATG ATCCTTTGGT TGATGAGAAA
ATTTCACTTG CAATTTACAA TAAAAACGAT ATTTTCAGCC AAGAATGCGA ACTGCAAGCC
ACGAGCTTCG GTGATGAAGT AGATGTAAAA ATGTATCCGA ATCGCCTTGA TTTGCAAGAT
TTGGCGTTTT GCACGATTGA CCCGATTGAT GCGAAAGATT TTGACGATGC AATATATTTT
GATGAACAAA AACGCGAAAT TTATGTCGCA ATAGCCGATG TAAGTGAATA TGTAAGCGAA
TATTCTCCGA TTGACAAAGA GGCGAAATTT AGAGGATTTT CAATATATTT TCCGCATAAA
TCAATTCCTA TGTTGCCACG AAATTTAAGC GAAAACATCT GTTCTTTAAA ACCGGATGTG
CCAAGGCTTG CGTATGTTTT TAAAATTTCA CTTGATGAAA GTTTAAATGT AAAAAATGAA
ATTTTAAACG AAGCTATAAT TTGTTCGAAA GCAAGGTTTA ATTATGATGA AATAGATAAA
ATTTTAAACG ATGAAAAAGT TCCGAACAAG CAATTTAATT GGATTTTGTC ATTAAATAAA
ATTTGTGAAA AACTGCGCGA AAAAAGGCTT GAAAAAGGTT TTGATTTCCG CACAAAAGAA
CTTCGACTGA CACTTGATGA AAACGGTCTT ATAAAAAGCA CGCGCTACGA AAACGATACG
CCATCTCACA AACTGGTTGA GGATTGTATG CTTTTGGCAA ATAAAGCAGC CGCTGCCAGG
ATAAAGCATG GGATTTTCAG AAATCACGGC ACGGCGGATC TTAAAAAAAT CAATGCGCTT
TTGGAAGATC TCGCAGTTTT GGGAATTGAC GCAGTTTATG AAAGCGATAA TGCTAAAATG
ATTAAAAAAA TTCAAGTCCA AGCTGATGAA ATAGGAATCC GCGAAATGGT TGATAAACTA
ATCATAAAAG CGCAAAAAAG AGCGGAATAT GGTGAATTCA GCCTTGGACA TTTTGCTTTG
GGATTTAAAA ATTACACACA TTTTACAAGC CCGATCAGAA GATACAGCGA TCTTTTACTG
CATCGATTTT TAAAGGCAAA CGCCAAAAAA GATACTAAAT TTTACAATTA CTTGCTTTTA
AATATCGGCG AAATTTGCGA AAATTTAAAC ATCCTTGAAC GCGAAGCTGA CAAAGTTGAA
TTTGATTTTA ACGATAGAAA ATTTGCGCGC TTTGCAAAAG AAAATTTAGG TAAAATTTTT
CGCTGTTATA TTGACGAAAA CACGACTCAA ACAATAGCAA GGCTTGATGA TAAATTAAAA
GGCGCAAGAA TTTTTATAGA TAATTTTACA TGCGATATTT TAACGCCGGT GCTTGTAAGA
CTTGAAAGCA GTGATATAGG AACTGCAAAA ATCACAGGAA AAGTGGTAAA AAAACAGGAT
GTATAG
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| Protein sequence | MKEFLKSFNI GVSKNSLSAK EQEITRNLLN VGAISEYKGK YYQNDGFVFG KLDISSNGTG
YLSAFDDKFE SDLIIENKHI NGAHFGDTVL AKIISKKKAR THAKVLMCVF PAFATSVVYT
KKFGREILGV NIKTEVATML RATQKSLKAL PEFTLLKIDN LKNEIVEVLG NLNDPLVDEK
ISLAIYNKND IFSQECELQA TSFGDEVDVK MYPNRLDLQD LAFCTIDPID AKDFDDAIYF
DEQKREIYVA IADVSEYVSE YSPIDKEAKF RGFSIYFPHK SIPMLPRNLS ENICSLKPDV
PRLAYVFKIS LDESLNVKNE ILNEAIICSK ARFNYDEIDK ILNDEKVPNK QFNWILSLNK
ICEKLREKRL EKGFDFRTKE LRLTLDENGL IKSTRYENDT PSHKLVEDCM LLANKAAAAR
IKHGIFRNHG TADLKKINAL LEDLAVLGID AVYESDNAKM IKKIQVQADE IGIREMVDKL
IIKAQKRAEY GEFSLGHFAL GFKNYTHFTS PIRRYSDLLL HRFLKANAKK DTKFYNYLLL
NIGEICENLN ILEREADKVE FDFNDRKFAR FAKENLGKIF RCYIDENTTQ TIARLDDKLK
GARIFIDNFT CDILTPVLVR LESSDIGTAK ITGKVVKKQD V
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