| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0237 |
|---|
| Symbol | |
|---|
| ID | 5409225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 216524 |
|---|
| End bp | 218659 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640869949 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_001405843 |
|---|
| Protein GI | 154148101 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.348858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG CAGTGGAAGT AAACAACAAT GTAGAAATTT TTGAGATTAA TAAAGTTGCT
AAGCAGGCAG CCGGTGCTTG TTTGATGAAA GTAAAAAATA CGGTGGTTTT GGCAACTGTT
GCAAGAGAAA ACACTCAAGT GGAAGAAGAT TTTTTACCGC TAACGGTGCA ATATATAGAA
AAACAATACG CTGCAGGCAG AATTCCGGGC GGTTATATAA AAAGAGAGAC AAAACCTGGA
GATTTTGAAA CATTAACTTC GCGTATAATA GATCGCTCAC TTCGTCCACT TTTTCCAAAA
GGCTATGCTT ATCCTACTCA AATCGTAGTT TTTGTGCTTT CTGCAGATCC TGAAATCGAT
TTGCAGGTTG TAGGATTAAA TGCGGCAAGT GTAGCGCTTT ATTTAAGTGA TATTCCTATG
AAAGCTCCGG TTTGCGGCGT TCGCGTCGGT TACATAAATG ATAGTTTTGT TATAAATCCT
ACAAATTCGG AACTCCAAAA TTCAGCGCTT GATTTATATG TAGCAGGCGT AAAAGATGAA
ATGCTGATGA TTGAGATGCG TTCTTTGCCG AACATGAACG GTGAAAATCA AAATATGAAC
GAATTTAGCG AAGATAAAAT GGTAGAAGCC ATAGATTTTG CTTCAAAGGC TATTTTAGCA
GGTTCTACAG CTTATGAAAA TACATTTTCA GCGCTCAAAA AGCCGGATGC CGCTTTAGAG
TATAAGCCTG AAGTGGAAGA TGAAAATATC GCAAATTTCA TAGAACAAAA TTTTACAAGC
GATGTGCAAG CAGCGATAAA TCAAATGGCA AAAAGCGAGC GAGCAACCGA GCTTGATAAA
ATCGTAAATA AAATTATGCA AAGCGAAACT GCAATTCAAA ACGAATGGCA AAAAAATGTA
GTTTCAAATA TTATAGGAAA GTTTAAACGA AAAATTATAA GAAGTCAAAT TATAAATGAA
CGCAGACGCG CTGATGGTAG AGCTTTGGAT GAAATTCGCC CGATTTCGAT AGAAACAAAT
ATTTTACCTA ATGCGCATGG AAGTTGTCTT TTTACGCGCG GACAAACTCA AGCTTTGGTT
GTTACGACAT TGGGCGGCGA AACAGACGCG CAAGTAAGCG ATAGCCTGAC TTCAAATACA
CCGATTAGCG AAAGATTTAT GTTCCAATAT AATTTTCCTG GATTTTGCGT CGGGGAAGCA
AGTCCTTTAA AAAGTCCGGG ACGTCGTGAA TTAGGACATG GAAATTTGGC AAAAAGAGCC
TTAACTCCTA GTGTGCCTTT GAATAATCCT CAAGTTATAA GAACTGTAAG TGAAATTTTG
GAAAGTAACG GAAGTAGTTC TATGGCAAGC GTTTGTGGCG GATCTTTATC TTTAAGGGCT
GCTGGAGTTT CTACTTTAAA ACTTGTAGCA GGAGTTGCTA TGGGCTTAAT TTTTGAAGAT
GATAAACATG CGATTTTAAC GGATATTATG GGACTTGAAG ACCATGACGG CGATATGGAT
TTTAAAGTTG CCGGTACTAG AGAAGGAATT ACAGCGCTTC AAATGGATAT AAAGCTTGGT
GGAATCAGCC TTGAAATTTT AAGAGAAGCG CTAAATCAAG CCAAAGATGG AAGAAATTAT
ATATTAAATT TAATGGAAGT CGCAAATGAC GATATAATTA TAAATGAAGA AATTCTACCT
AAAATTGAAA TTTTCGGTGT AGATCCGAAT AAAATGGTAG ATATTATAGG ACAAGGCGGA
AAAACCATTA AAGAACTTAT TGATAAATAT GAAGTCAGTA TCGATTTGGA ACGTGATAGC
GGCGAAGTTA AAATTCAAGG TGCAAATAAA ATAAATGTGG AAAACGCTAA ATCCGATATT
TTAAATATCG TAAAAAAATC AAATGATTTC AAAAAAGGCT CAAAATTCGG TCATCATCAC
GAAAGAAAAG AAACTTCAAA TTTTCAAGTC GGAGAAGAAT TTGATGGAGT TGTGAAAAAG
ATTATGGATT TTGGCGCATT TATAAGTTTA AAAGATGGTA TTGACGGACT TTTGCATGTA
TCAAAAATAA AAACACAGCT TAGCGAAGGT GATACTTTAC GTGTAAAAGT AGAAGAGATA
AAACGTGGTA AAATTTCATT AGAACTTTGT GAATAA
|
|---|
| Protein sequence | MKYAVEVNNN VEIFEINKVA KQAAGACLMK VKNTVVLATV ARENTQVEED FLPLTVQYIE
KQYAAGRIPG GYIKRETKPG DFETLTSRII DRSLRPLFPK GYAYPTQIVV FVLSADPEID
LQVVGLNAAS VALYLSDIPM KAPVCGVRVG YINDSFVINP TNSELQNSAL DLYVAGVKDE
MLMIEMRSLP NMNGENQNMN EFSEDKMVEA IDFASKAILA GSTAYENTFS ALKKPDAALE
YKPEVEDENI ANFIEQNFTS DVQAAINQMA KSERATELDK IVNKIMQSET AIQNEWQKNV
VSNIIGKFKR KIIRSQIINE RRRADGRALD EIRPISIETN ILPNAHGSCL FTRGQTQALV
VTTLGGETDA QVSDSLTSNT PISERFMFQY NFPGFCVGEA SPLKSPGRRE LGHGNLAKRA
LTPSVPLNNP QVIRTVSEIL ESNGSSSMAS VCGGSLSLRA AGVSTLKLVA GVAMGLIFED
DKHAILTDIM GLEDHDGDMD FKVAGTREGI TALQMDIKLG GISLEILREA LNQAKDGRNY
ILNLMEVAND DIIINEEILP KIEIFGVDPN KMVDIIGQGG KTIKELIDKY EVSIDLERDS
GEVKIQGANK INVENAKSDI LNIVKKSNDF KKGSKFGHHH ERKETSNFQV GEEFDGVVKK
IMDFGAFISL KDGIDGLLHV SKIKTQLSEG DTLRVKVEEI KRGKISLELC E
|
|---|
| |