| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2434 |
|---|
| Symbol | |
|---|
| ID | 5410698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2512793 |
|---|
| End bp | 2514415 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640869691 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001405591 |
|---|
| Protein GI | 154151973 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR03269] methyl coenzyme M reductase system, component A2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAC CACTCATCAC GGTCGACAAC GTCAGCATGG ATTTTGACGG CACGCATGCG
CTCAAAAATA TTTCTTTTGA GCTTGCCGAA GGGGAGATCC TGGGGATCAT CGGCAGGAGT
GGTGCCGGAA AGACCGTGCT TATCCACCTC ATGCGAGGGG TGGAGCAGCC ACCCACGAGC
GGCAGGATCA TCTATCATGT TTCTGCATGC CCTTCCTGCG ATTACATGGA TGTGCCAAGT
GCTGCAGGCA AGCCCTGCCC GCACTGCGGG GCCGTTCTTG CACCCCTTGA TGTAGATCTT
TGGAATGAGA CAAACGAAAT GCTAAAGCGG AGGGTGATGC GCCGAACCGC GATTATGTTC
CAGCGGACTT TTGCCCTGTA CGGCGATGAC CGCGTGATCG AGAACGTCCT TCATGCACTC
GATGACATCA ACTATCCCCC GGAAAAAGCG ATCAACCGGG CAGCCGACCT TATCGACCAG
GTCCGGCTTT CCCACCGGAT GATGCATATC GCACGCGATC TCTCGGGCGG CGAGAAACAA
CGGGTAGTGC TTGCCCGGCA GCTCGCCAAA GAGCCATTCT TACTCTTCGC CGATGAGCCC
ACCGGAACCC TGGATCCTGG CACGGCAAAA ATCGTGCACA CGATGCTCAC CGAGGCAGCG
AAGACCAGCA ACATGGGGAT GGTAGTCACC TCCCACTTCT CGCAGGTCAT CGAGGATGTT
GCAAGCAGGG CAATCCTCCT TGTCGATGGT GCAATTGCAA AGATCGGGGC CCCAAAAGAT
GTGATAGCCG AGTTTATGGC CGGTTGCGAG GATACGGAGA CCTTCGAACA CGCCGTGGTA
GGAGAAAGAA TCGTGGAGGC CCGGGACCTT ACCAAGCGTT ACATCTCGGT GGACCGCGGT
GTGGTCCGGG CAGTAAATGG CGTCAGTTTC GAGATCTACG AGAAAGAGAT CTTCGGCATC
ATTGGGAAAA GCGGGGCCGG AAAGACCACA CTCTCGCAGA TCATTGCGGG TTTAATTGAG
CCCACAAGTG GGGAGATCAA CGTCAGGATC GGCGAGGAAT GGGTGGACAT GACAAAGCCC
GGCGTGGACC AGCGGGGACG GGCCAAAGAG TACATCGGCC TTCTGCACCA GGAATACGAT
CTCTTCCCCC ACCGCACGGT GCTCGACAAC CTCACCGATG CCATCGGACT TGAATTCCCC
AAGGAGCTGG CCATGCGTAA GGCACTGGTT ACGCTCAGGA TGGCCGGGTT TTCTGAAGAG
AAAAGCAAGG AGATCCTTGA CCGGCTGCCG GGCCAGCTCT CGGAGGGGGA ACGCCACCGG
GTTGCGCTCG CACAGGTTCT GATTCGGGAA CCCCGTATCG TGATACTTGA TGAACCTACC
GGTACAATGG ATCCGATCAC CAAGATCGAT GTCAAGCATT CCATTATGCA CTCCCGGGAT
GACATCGATG AGACGTTTGT GGTGGTCTCG CACGACATGG AGTTCGTACG CGACATCTGC
GACCGCCTTG CCCTGATGAG GGGAGGGAAA ATCGTGGAGA TCGGAAAAAC CGCCGAGGTC
CTTGCCCACC TGACCGAGGA CGAGCGCAAG GTTATGAGCC AGAACCAGCC GCCGGCTGCC
TGA
|
|---|
| Protein sequence | MKAPLITVDN VSMDFDGTHA LKNISFELAE GEILGIIGRS GAGKTVLIHL MRGVEQPPTS
GRIIYHVSAC PSCDYMDVPS AAGKPCPHCG AVLAPLDVDL WNETNEMLKR RVMRRTAIMF
QRTFALYGDD RVIENVLHAL DDINYPPEKA INRAADLIDQ VRLSHRMMHI ARDLSGGEKQ
RVVLARQLAK EPFLLFADEP TGTLDPGTAK IVHTMLTEAA KTSNMGMVVT SHFSQVIEDV
ASRAILLVDG AIAKIGAPKD VIAEFMAGCE DTETFEHAVV GERIVEARDL TKRYISVDRG
VVRAVNGVSF EIYEKEIFGI IGKSGAGKTT LSQIIAGLIE PTSGEINVRI GEEWVDMTKP
GVDQRGRAKE YIGLLHQEYD LFPHRTVLDN LTDAIGLEFP KELAMRKALV TLRMAGFSEE
KSKEILDRLP GQLSEGERHR VALAQVLIRE PRIVILDEPT GTMDPITKID VKHSIMHSRD
DIDETFVVVS HDMEFVRDIC DRLALMRGGK IVEIGKTAEV LAHLTEDERK VMSQNQPPAA
|
|---|
| |