| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2404 |
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| Symbol | |
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| ID | 5411625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2473290 |
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| End bp | 2474192 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640869661 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001405561 |
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| Protein GI | 154151943 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.633415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG AATCGGACAG TTTTGAGAAG TTTTTTGAGA TGTACAAGCG CTTCTGCTAC
ACGTTCGGCC GCTCCTTTGA TCGCAACCCG AACCGTGATA TCATCAAGCT GATCTACCAG
GCAGATCTCG AAATGACACC GGGAATGTTC ACATCCCTAT GGATAGTTTC CACAATCCTT
GTCGGTTCTG TCATGGTACT GGTCGCTTCT ATCATCTTTC TCGTTCCCCA GAGCCCGTTT
GCCATACCCA GCCCGGCACC TTATATCCTG CTCTTTGCCC TGATTGGATC GGCAGCAATT
GCCATTGGCT TTCCCTTCTA CCTGCAGAAC CAGATAGAGA ACAAAAAAAG GGATATCGAT
ACCCAGATCC CCTATGCCCT TGCCTTCATG TCGATCCTTG CCAGTTCGGG CGCTACCCCG
CTGGATATCA TCAGGAGGAT TGCACGGGAG GATTACGGGC AGATCTCAAA CGAGTTCCGC
AAGGTGCTCT TCCGGGTGGA TATCCTCGGA GAGGACGTGG TAACGGCCAT GAACGGCCTT
GTGCAGAACA CGCCGTCCGA TCTGTTCCGG GACATCTGCA TCGATATAAC CAACATCATC
TACGGCGGTG GCGGGCTGAA ATCTTACCTG GAGACCAAGT CAAAAGAACT CATGGCAATC
CGGCGCCAGA CCTATAAGGA GTTCGTGGAG TCCCTTGCCG TATTCGGGGA AGGATACCTT
GGTGGGGTTG TTATGACGAT CACCCTCGCC ATCCTGGGAG TTGTGATCTC AGGGGCGCTG
GGCATCCAGC TGGGCCCGTT CTCTGCGCAT GACATGTTTA ACTACCTGAT CTACCTGCTG
ATCCCGCTCA TCAACGTGGT CTTCCTGCAG ATGCTTGCCG TGAAATATTC GACCAATCCC
TGA
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| Protein sequence | MAAESDSFEK FFEMYKRFCY TFGRSFDRNP NRDIIKLIYQ ADLEMTPGMF TSLWIVSTIL
VGSVMVLVAS IIFLVPQSPF AIPSPAPYIL LFALIGSAAI AIGFPFYLQN QIENKKRDID
TQIPYALAFM SILASSGATP LDIIRRIARE DYGQISNEFR KVLFRVDILG EDVVTAMNGL
VQNTPSDLFR DICIDITNII YGGGGLKSYL ETKSKELMAI RRQTYKEFVE SLAVFGEGYL
GGVVMTITLA ILGVVISGAL GIQLGPFSAH DMFNYLIYLL IPLINVVFLQ MLAVKYSTNP
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