Gene Mboo_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2394 
Symbol 
ID5412117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2464390 
End bp2464995 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID640869650 
Productorotate phosphoribosyltransferase-like protein 
Protein accessionYP_001405551 
Protein GI154151933 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0856] Orotate phosphoribosyltransferase homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.421061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC TTGACGATCT GATTGCCCGG GCAAAACTCC TTTTATCCGA GGGTCACAGC 
CCCGGCCAGA TTGCAGACGA GCTCTCACTC TCCATGGAAA CGGTGACCTG GCTGTTGACC
CAGGCAAATG GCGGATCGGC AGCACCAAAA GACGTTCATA TTGACTGGAC CGCAGTGAGC
AGCCAGGCAC CCCTGCTCGA TGGGATTGCC CTCATGCTGC TGAACCGGTA TTACGGTGCA
CAGAAAGACC CGGCCGCAGC ATCTGCAGAC GTGATCGTGG GCATTGCCCT CTCGGGGATT
CCTCTTGCAA CGGTAATCTC GGTCCAGGAG GCTGCACAGC TTGCCATCTA TCATCCTGCC
AAGCAGAACG CAAGCGAGCA CCCGGTTGGC TCGATCAGCG GGAACTTTGC ACCTGTGGCA
AAGGAACGCT GCATCATTGT CGATGATGTG ATCACATCGG GAAACACGAT GAGGGAAGTT
GTCAAATATC TCAAGAAGCA CGGGGCAGTC CCGGTCGCTA TCTGGGTTAT CTTCGATAAG
CGCGGCATCA GGGATATTGA CGGGGTTCCG GTCTACTCGC TCTTCAAGAT ATCAAGGATC
GACTAA
 
Protein sequence
MSSLDDLIAR AKLLLSEGHS PGQIADELSL SMETVTWLLT QANGGSAAPK DVHIDWTAVS 
SQAPLLDGIA LMLLNRYYGA QKDPAAASAD VIVGIALSGI PLATVISVQE AAQLAIYHPA
KQNASEHPVG SISGNFAPVA KERCIIVDDV ITSGNTMREV VKYLKKHGAV PVAIWVIFDK
RGIRDIDGVP VYSLFKISRI D