Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2391 |
Symbol | |
ID | 5412114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2460846 |
End bp | 2462834 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869647 |
Product | ATP-dependent protease Lon |
Protein accession | YP_001405548 |
Protein GI | 154151930 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.654963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAATG CAAAACCAGA AGAACCGGTT CAGGAGATCA ATGCTCCAGG GTCCCCCCAG CAGGAATCCG CTGTTGCAGG ACCGGCAGGA ACCGGGCCTA CGGCACCGGC CCAGGCTGCA CATCAGGTGG AGGGAGCATC CTCCCAGATC GAGGTTCCGC CCAAGCTCAT TGACCAGGTG ATCGGCCAGG AGCGTGCGGT CGAGGTTATC CGGAAAGCGG CAACCCAGCG CCGTCACGTT ATGATGATCG GGAGCCCGGG GACCGGCAAG TCGATGCTTG CCAAGGCAAT GGCCGAGCTC CTGCCAAAAG AGGAGCTTCA GGACATCATG GTGTACCCGA ACTCCGATGA TCCCAACAAC CCTATCATAC GGACCGTAGC GGCAGGCCGT GGCAAGCAGA TCGTTGCTGC CCACAAGATC GAGGCCAAGA AAAAGGTCCA GTTCAGGAAC ACCCTTCTCC TGATCCTCAT CATCGGCATC ATTGGATATG CGTTTATCAC CATGCAGTGG CTCATGGGGA TCATCGCGGC CGCGTTTGTC TTTATGGCGC TCCGGTATAC GATGCCCCGC GAGGAAGCGA TGGTGCCCAA GCTGCTTGTT GCAAACGATG TGAAGAGCAA CGCACCGTTC ATTGACGGGA CCGGCTCGCA TGCCGGGGCA TTGCTGGGCG ATGTACGGCA TGACCCGTTC CAGAGCGGCG GCCTTGAGAC TCCTGCCCAC GACCGCGTGG AGGCAGGGGC GATCCACCGT TCTAACTGCG GGGTACTCTT CATCGATGAG ATCAACACGC TTGATCCCCA CTCCCAGCAG AATCTCCTGA CCGCACTCCA GGAAGGGGAA TTTCCTATTA CCGGCCAGAG CGAGCGCTCG AGTGGTGCCA TGGTCAGGAC CGAGCCCGTC CCCTGCCGGT TTGTGATGGT CGCAGCCGGC AACCTTGATG CAATCCAGGG TATGCACCCG GCGCTGCGGT CCCGTATCCG CGGCTATGGG TACGAAGTCT ACATGGCCGA AAGCATGGAA GACACACCGG AAAACCAGCA GAAATACATC CGGTTCATCG CTCAGGAAGT CAAGAACGAT GGGAAGATCC CGCACTTCGA TAAGAGTGCC ATTGACGAAA TTATCCGCGA GGCCCGCAGA CGCTCCAACC GCAAGGGTCA CCTGACCCTG AAGCTCCGTG ATATGGGCGG CCTGATCCGG GTTGCCGGTG ACATTGCCCG GCAGGAAGGG GCAACGCTGA CCACCGCGGC CCATGTCATC ACAGCAAAGA AGACGGCCCG GTCGATCGAG GACCAGGTTT CCGATGAGGT TACCCGTCAC CTCCGTGAAT ACGAGATGAC CGTGGTTGAA GGGACCCGGG TCGGGCGGGT GAACGGCCTT GCCGTCACCG GCAGCGACGC CGGCTCGGTC CTGCCCATTA TGGCTGAAGT AACCCCTGCG ATCGGGAAGG AAGGCGGTGA AGTGATTGCC ACCGGTCTCT TAAAGGAGAT TGCGCAGGAG TCCATCAAGA ATGTCAGCGC CATTCTCAAA AAGTTCACCG GCAAGGATGT GAAAAATATC GATATCCACA TCCAGTTCAT CGGCACGTAC ATGGGTATAG AGGGAGATTC TGCATCCATC AGTGTGGCAA CCGCTGTAAT CAGCGCGATC GAGGGAATAC CCGTCCGGCA GGACCTTGCC ATGACCGGGT CGCTCTCTGT CCGGGGCGAT GTGCTCCCGG TTGGTGGCGT TACCTACAAG ATCGAGGCTG CGGCAAAAGC CGGGATCAAG ACCGTGCTCA TCCCGAGGAT GAACATCAAC GATGTCCTGA TCGAAGAACA GTACAAATCG AAGATAACGA TCATCCCGGT TGACACTATC GATGAAGTGC TCAAGCATGC GCTTGTCCCC GAGAACATGG ACGGCTTCCT CTCCAAACTC AAGAAGATGG CAGTCCGTTC CACCTCGGCC TTTGCCGAGG CCCCGGTGAT CAATACAACC ACGGCATGA
|
Protein sequence | MENAKPEEPV QEINAPGSPQ QESAVAGPAG TGPTAPAQAA HQVEGASSQI EVPPKLIDQV IGQERAVEVI RKAATQRRHV MMIGSPGTGK SMLAKAMAEL LPKEELQDIM VYPNSDDPNN PIIRTVAAGR GKQIVAAHKI EAKKKVQFRN TLLLILIIGI IGYAFITMQW LMGIIAAAFV FMALRYTMPR EEAMVPKLLV ANDVKSNAPF IDGTGSHAGA LLGDVRHDPF QSGGLETPAH DRVEAGAIHR SNCGVLFIDE INTLDPHSQQ NLLTALQEGE FPITGQSERS SGAMVRTEPV PCRFVMVAAG NLDAIQGMHP ALRSRIRGYG YEVYMAESME DTPENQQKYI RFIAQEVKND GKIPHFDKSA IDEIIREARR RSNRKGHLTL KLRDMGGLIR VAGDIARQEG ATLTTAAHVI TAKKTARSIE DQVSDEVTRH LREYEMTVVE GTRVGRVNGL AVTGSDAGSV LPIMAEVTPA IGKEGGEVIA TGLLKEIAQE SIKNVSAILK KFTGKDVKNI DIHIQFIGTY MGIEGDSASI SVATAVISAI EGIPVRQDLA MTGSLSVRGD VLPVGGVTYK IEAAAKAGIK TVLIPRMNIN DVLIEEQYKS KITIIPVDTI DEVLKHALVP ENMDGFLSKL KKMAVRSTSA FAEAPVINTT TA
|
| |