Gene Mboo_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2391 
Symbol 
ID5412114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2460846 
End bp2462834 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content58% 
IMG OID640869647 
ProductATP-dependent protease Lon 
Protein accessionYP_001405548 
Protein GI154151930 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.654963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG CAAAACCAGA AGAACCGGTT CAGGAGATCA ATGCTCCAGG GTCCCCCCAG 
CAGGAATCCG CTGTTGCAGG ACCGGCAGGA ACCGGGCCTA CGGCACCGGC CCAGGCTGCA
CATCAGGTGG AGGGAGCATC CTCCCAGATC GAGGTTCCGC CCAAGCTCAT TGACCAGGTG
ATCGGCCAGG AGCGTGCGGT CGAGGTTATC CGGAAAGCGG CAACCCAGCG CCGTCACGTT
ATGATGATCG GGAGCCCGGG GACCGGCAAG TCGATGCTTG CCAAGGCAAT GGCCGAGCTC
CTGCCAAAAG AGGAGCTTCA GGACATCATG GTGTACCCGA ACTCCGATGA TCCCAACAAC
CCTATCATAC GGACCGTAGC GGCAGGCCGT GGCAAGCAGA TCGTTGCTGC CCACAAGATC
GAGGCCAAGA AAAAGGTCCA GTTCAGGAAC ACCCTTCTCC TGATCCTCAT CATCGGCATC
ATTGGATATG CGTTTATCAC CATGCAGTGG CTCATGGGGA TCATCGCGGC CGCGTTTGTC
TTTATGGCGC TCCGGTATAC GATGCCCCGC GAGGAAGCGA TGGTGCCCAA GCTGCTTGTT
GCAAACGATG TGAAGAGCAA CGCACCGTTC ATTGACGGGA CCGGCTCGCA TGCCGGGGCA
TTGCTGGGCG ATGTACGGCA TGACCCGTTC CAGAGCGGCG GCCTTGAGAC TCCTGCCCAC
GACCGCGTGG AGGCAGGGGC GATCCACCGT TCTAACTGCG GGGTACTCTT CATCGATGAG
ATCAACACGC TTGATCCCCA CTCCCAGCAG AATCTCCTGA CCGCACTCCA GGAAGGGGAA
TTTCCTATTA CCGGCCAGAG CGAGCGCTCG AGTGGTGCCA TGGTCAGGAC CGAGCCCGTC
CCCTGCCGGT TTGTGATGGT CGCAGCCGGC AACCTTGATG CAATCCAGGG TATGCACCCG
GCGCTGCGGT CCCGTATCCG CGGCTATGGG TACGAAGTCT ACATGGCCGA AAGCATGGAA
GACACACCGG AAAACCAGCA GAAATACATC CGGTTCATCG CTCAGGAAGT CAAGAACGAT
GGGAAGATCC CGCACTTCGA TAAGAGTGCC ATTGACGAAA TTATCCGCGA GGCCCGCAGA
CGCTCCAACC GCAAGGGTCA CCTGACCCTG AAGCTCCGTG ATATGGGCGG CCTGATCCGG
GTTGCCGGTG ACATTGCCCG GCAGGAAGGG GCAACGCTGA CCACCGCGGC CCATGTCATC
ACAGCAAAGA AGACGGCCCG GTCGATCGAG GACCAGGTTT CCGATGAGGT TACCCGTCAC
CTCCGTGAAT ACGAGATGAC CGTGGTTGAA GGGACCCGGG TCGGGCGGGT GAACGGCCTT
GCCGTCACCG GCAGCGACGC CGGCTCGGTC CTGCCCATTA TGGCTGAAGT AACCCCTGCG
ATCGGGAAGG AAGGCGGTGA AGTGATTGCC ACCGGTCTCT TAAAGGAGAT TGCGCAGGAG
TCCATCAAGA ATGTCAGCGC CATTCTCAAA AAGTTCACCG GCAAGGATGT GAAAAATATC
GATATCCACA TCCAGTTCAT CGGCACGTAC ATGGGTATAG AGGGAGATTC TGCATCCATC
AGTGTGGCAA CCGCTGTAAT CAGCGCGATC GAGGGAATAC CCGTCCGGCA GGACCTTGCC
ATGACCGGGT CGCTCTCTGT CCGGGGCGAT GTGCTCCCGG TTGGTGGCGT TACCTACAAG
ATCGAGGCTG CGGCAAAAGC CGGGATCAAG ACCGTGCTCA TCCCGAGGAT GAACATCAAC
GATGTCCTGA TCGAAGAACA GTACAAATCG AAGATAACGA TCATCCCGGT TGACACTATC
GATGAAGTGC TCAAGCATGC GCTTGTCCCC GAGAACATGG ACGGCTTCCT CTCCAAACTC
AAGAAGATGG CAGTCCGTTC CACCTCGGCC TTTGCCGAGG CCCCGGTGAT CAATACAACC
ACGGCATGA
 
Protein sequence
MENAKPEEPV QEINAPGSPQ QESAVAGPAG TGPTAPAQAA HQVEGASSQI EVPPKLIDQV 
IGQERAVEVI RKAATQRRHV MMIGSPGTGK SMLAKAMAEL LPKEELQDIM VYPNSDDPNN
PIIRTVAAGR GKQIVAAHKI EAKKKVQFRN TLLLILIIGI IGYAFITMQW LMGIIAAAFV
FMALRYTMPR EEAMVPKLLV ANDVKSNAPF IDGTGSHAGA LLGDVRHDPF QSGGLETPAH
DRVEAGAIHR SNCGVLFIDE INTLDPHSQQ NLLTALQEGE FPITGQSERS SGAMVRTEPV
PCRFVMVAAG NLDAIQGMHP ALRSRIRGYG YEVYMAESME DTPENQQKYI RFIAQEVKND
GKIPHFDKSA IDEIIREARR RSNRKGHLTL KLRDMGGLIR VAGDIARQEG ATLTTAAHVI
TAKKTARSIE DQVSDEVTRH LREYEMTVVE GTRVGRVNGL AVTGSDAGSV LPIMAEVTPA
IGKEGGEVIA TGLLKEIAQE SIKNVSAILK KFTGKDVKNI DIHIQFIGTY MGIEGDSASI
SVATAVISAI EGIPVRQDLA MTGSLSVRGD VLPVGGVTYK IEAAAKAGIK TVLIPRMNIN
DVLIEEQYKS KITIIPVDTI DEVLKHALVP ENMDGFLSKL KKMAVRSTSA FAEAPVINTT
TA