Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2386 |
Symbol | |
ID | 5412109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2454744 |
End bp | 2456822 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869642 |
Product | type II secretion system protein E |
Protein accession | YP_001405543 |
Protein GI | 154151925 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.934402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCTG AATTCCAGTC TTTATCGGAA AACCTCGGAA CATCTTACCG GAAAACCATT GCCGCGTTTT CCCAGCATTC AGCCCGGGGC AGCCTGCTCC TTGTTTCGAC AGGGCTTGCA TCGGCGGCGA CCGGTGTCGG TGTCCTTTTT GTAGATCTGC CCATTCTCCT GATGGGCATC CTGTCTGTTG TCTCACTGGC CGCACTGATC CTTTTTGTAG CCGGTGTACG GGCGCGTTTC TTCCCACCTC ATGATCGGCC GATACAGGAA ATTACAGAGC CTGCAGGTTC GAAAATGGCA AAAGGAGGAA AAATCTCCGG TCTTCCGGCG CCGTGTCTTC GGTTGGTCCG GCTCTTGGGG AACCGGACCG ACCGCGGCGA TGCGGGGATC CTTGCCATTT TTATCGTAGC AGTCGCGACG GGGTATACTG CACTCTTTGT GGATCTGCCG CTGGCACTCC TTGTGGCCTC TGGTCTCATT TCGCTGGTCA TGCTTGTGAC TGTCGGGCTT GCAGCCGGAT TCAGGTTTAT CCCGGAAAAG ATGATGGCGT TGCTGCCAGA GAGCCGGCAG TACGGGATTC CTATCCAGAA CCCAACCGGT CAGTCTGCTC GGACCTTTGC CCTCACCCCC TTGGAACCGG GAGGAGATCT CCCGGAAAAA CAAAGTACCG CGATCCTTGA TGTGTACTGG GTCGAGTCCC CCTTTGCGTA TGTCAAACTT GCCCGGCAGG GAAACCTCGG TTTTGTGTAC ACGGTGGTCG AGCCGGCACT TTCCCCCCGG GAGAAAATTG TCCTCCAGGA GACCTACAAC TATTTGCGCG ATGTCATTGT CTTTGACAAC CCGGAAAAAT CCCCTCAGGA CCTGCTCAGC CGGGAAAACG TCTGGAAGAT CCTTCATGAG AACGATCCCT CGATCAGCCA TGAGCGCCTC CCCATTCTCG AGTATTATCT TCACCGCGAT CTTTCGGGTT TTGGGATCCT CGAACCGCTC ATGCATGACC CGGCGCTTGA AGACATCAGC TGCAATGGGG AAAATCTGCC GGTTTTTGTC TTCCACCGTG TCCATGGAAG CCTGAGAACG AGCGTTACCT TCCGGAAAGG TGAACTCAAC CAGTTCGTCC TCAAACTCGC CCAGAAAGCC AACAAGCAGA TCTCGCTTAC CAACCCGATG GTAGATGCTG CCCTTCCTGA CGGTTCGCGG GTCCAAGTCA CCTACAGCAA TGTCATCTCA ACCAACGGCA GCTCCTTTAC TATAAGGAAA TTCCGCAGCG ATCCGATGAC TCCGCTGGAC CTGATAAAAT TCGGGACGTA TAACAGCGAG ATCCTTGCCT TTCTCTGGTT GGTGATCGAG CACCGGAGAA GCCTGATTAT CGCAGGTGGG ACAGCAAGCG GCAAGACCTC GACCATGAAT GCCCTCTCTC TGTTCATTCC CCTCAATTCA AAGATAGTCT CTCTTGAGGA TACCCGGGAG ATCCAGCTCC CTCACAAGAA CTGGCTGGCT ACCCAGACAC GGGAGCTGAC CATGCCAGGA GCGCATGGGG ACGTGGATCT CTTCTCGCTG CTGAAGTCCT CCATGCGCCA GCGGCCCGAG TACATTATTG TCGGGGAGGT GCGGGGCAAG GAGGCCCAGA CGCTCTTCCA GGCAATGAAC ACCGGCCACG CGACGCTCTC CACCATCCAT GCCGGCAGTG TCCAGGAGGC TATCAACCGG CTCACCCACG AACCGATCAA TGTTCCGCCG GTGATGTTCA CCGCGCTCGA CATCGTGGTC AACCAGGCAG TATTCACTTT TGGCAGCATG CGGGTACGGC GCTGTTCAGC AATTCATGAG ATCTCTGTTG ACGATCAGGG AAATATCATC CCGGTCAAAC TATTCGAGTG GGATACGGCT AGCCAGCAGT TCCGTAAAAC AGGAATGAAG TCGAAAGTTC TTGATGAGAT CGCCGCAATG GGAAACTGGT CAACGGAACA GGTGGCAGAC GAACTCAGGA GGCGCGAAGA GTTCCTTAAG ATCGCCGTTG ACGTACCCAC TCCGGACATC ATTGATCTCG CAAACGCTAT CGCAGACCTT GGGGAATGA
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Protein sequence | MSPEFQSLSE NLGTSYRKTI AAFSQHSARG SLLLVSTGLA SAATGVGVLF VDLPILLMGI LSVVSLAALI LFVAGVRARF FPPHDRPIQE ITEPAGSKMA KGGKISGLPA PCLRLVRLLG NRTDRGDAGI LAIFIVAVAT GYTALFVDLP LALLVASGLI SLVMLVTVGL AAGFRFIPEK MMALLPESRQ YGIPIQNPTG QSARTFALTP LEPGGDLPEK QSTAILDVYW VESPFAYVKL ARQGNLGFVY TVVEPALSPR EKIVLQETYN YLRDVIVFDN PEKSPQDLLS RENVWKILHE NDPSISHERL PILEYYLHRD LSGFGILEPL MHDPALEDIS CNGENLPVFV FHRVHGSLRT SVTFRKGELN QFVLKLAQKA NKQISLTNPM VDAALPDGSR VQVTYSNVIS TNGSSFTIRK FRSDPMTPLD LIKFGTYNSE ILAFLWLVIE HRRSLIIAGG TASGKTSTMN ALSLFIPLNS KIVSLEDTRE IQLPHKNWLA TQTRELTMPG AHGDVDLFSL LKSSMRQRPE YIIVGEVRGK EAQTLFQAMN TGHATLSTIH AGSVQEAINR LTHEPINVPP VMFTALDIVV NQAVFTFGSM RVRRCSAIHE ISVDDQGNII PVKLFEWDTA SQQFRKTGMK SKVLDEIAAM GNWSTEQVAD ELRRREEFLK IAVDVPTPDI IDLANAIADL GE
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