| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2378 |
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| Symbol | |
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| ID | 5410671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2446413 |
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| End bp | 2447396 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869634 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001405535 |
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| Protein GI | 154151917 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0410349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAGCG GAAACTATCT TCTCCGCCGC ATCTGTTACA GCGGGGCATC GTTTTTTGTC
TGCATGACCA TCACTTTCTT CCTTCTTCAC CTCATGCCCG GGGACTATAT CACCAACTAC
CTTCTCTCCC TTTCTAACCA GATCCCTCAG GCAGCAGTCG ACCAGTTCCG CCACCAGTTC
GGCCTCGATC TCCCGCTCAC CCAGCAGTAC GCTCTCTATA TTGTAAACAT CCTCCACGGG
CAATGGGGGT ATTCCTATGC GTACGGCCAG CCGGTCTTTT CCATGATCAC CGAGAAACTC
GGCTGGTCAC TGATCCTTCT TGTGCCGGCA ACGATTCTCG GTATCCTTAT CGGGACAATT
ATCGGGGCAT GGTCGGGATG GAGATCCGGG GGAAAACAGG ATCTTGCGAT CTTCAATGTC
ATGATCGTGA TCCGGGCAAT TCCGGAGTTC TGGTGGGCGA TCATGGCCGT GATGGTCTTT
GCCTTTTATC TTCGGTGGTT CCCCCTGGGA GGGTACACCA GTATCAGCGT GCTCTCCACC
GGCCTCTCCA TCCCCGACCT GCTGTACCAT GCGATCCTTC CCATCGCCCT GATGACCTTT
TTTATAGCCA CCGGGAACTA CTACGTGATG CGCAACTCGA TGATCGCGGT CATCGGGGAG
GACTACATCA CCACCGCCCG GGCAAAAGGA CTCGATGAGC GGAATATCCT CTGGCGCCAC
GCGCTCAAAA ACGCCCTGCT GCCCATGGTG ACCATCACCA CCTTCCAGTG CGCTGCGATC
ATCATGGGAA ACGTCTTTGT CGAGACGGTC TTTTCCTGGC CGGGGATAGG TTTTCTGACC
ACCGAAGCGC TCACGAACCG CGATCTGCCG CTGCTCGAAG GCATTTTCCT CCTCGACTCC
CTTATGACCA TCGGCGCGAT GCTCGTGGCT GATATCTTAT CTTCCATGAT CGATCCCCGG
ATCAGGATGG GGAACGATGA GTAG
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| Protein sequence | MISGNYLLRR ICYSGASFFV CMTITFFLLH LMPGDYITNY LLSLSNQIPQ AAVDQFRHQF
GLDLPLTQQY ALYIVNILHG QWGYSYAYGQ PVFSMITEKL GWSLILLVPA TILGILIGTI
IGAWSGWRSG GKQDLAIFNV MIVIRAIPEF WWAIMAVMVF AFYLRWFPLG GYTSISVLST
GLSIPDLLYH AILPIALMTF FIATGNYYVM RNSMIAVIGE DYITTARAKG LDERNILWRH
ALKNALLPMV TITTFQCAAI IMGNVFVETV FSWPGIGFLT TEALTNRDLP LLEGIFLLDS
LMTIGAMLVA DILSSMIDPR IRMGNDE
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