Gene Mboo_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2364 
Symbol 
ID5411640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2428985 
End bp2429845 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content57% 
IMG OID640869620 
Producthypothetical protein 
Protein accessionYP_001405521 
Protein GI154151903 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.614157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCG TTACTGATTC CACCCTCTTT TCCCGGCCCG GTTCGATCTT GGAGGAGACC 
CTTACGGAGA TCCGGGATAT TCTCGGCAGC AATTTTGAAA CGATCACAAT CGAACGGGTT
GTCATCGGGA TCTTCTTTAC CGGCATCAAA CTTAGCGACG GCTCCGGTGG GATCTGCTTT
ACTCCCATAA AGGAGATCCC GGATGCTGTC TGCTGCCCGA GCTCTGCCCG GGCAATGCCG
TACCCGGGAA AATTTACCGG GAAACCCGCC GCGGATTTTA TCCGGGATCT GGCCGGGGCC
CCGCCCCTGA AAAAAGCGGT TGGCGTTGCT GTCATCAATG CCCTCGCGGA GTCCTGCAGG
AAACGCCGGC CTGATGATGC TTGCGTGACC GATGCAGGGA AAGATGCACT CGAAACTCTC
CTTCTGCCGG AAATGGGATA TGTGGTGGTT GTCGGAGCGC TTGTACCGAT TATTAAGCGC
CTGAAAGTCC GGGGAAAACC GTTTGGGATT CTCGAACTCG ATCTGCGTAC CCTCAAACCC
GATGAATTGC CGTTTGCCAT CCCACCAGGG AAAGCAGATG CAGAGATCCG CAGGGCCGAC
ATGCTTGTCA TTACCGGCAC AACCCTTCTG AACAACACGC TCGAACCCCT TCTTGCCTCG
GCACGGCCCG GTGCAGAGAT CGTTGTCGTG GGACCGACCG CGAGTATGCT CCCCGCCGCA
TTCTTCCGGC GCGGTGTCAC GGTGCTGGGA GGAGATGTTG TTACCGATCC GGACCGGCTG
CTCGATACGA TAGCCGAGGG CGGATCAGGG TATCATTTCT TTGGAAAATC TGCGGAGAAG
ACCCTCACCC GGCAGCGGTA A
 
Protein sequence
MMPVTDSTLF SRPGSILEET LTEIRDILGS NFETITIERV VIGIFFTGIK LSDGSGGICF 
TPIKEIPDAV CCPSSARAMP YPGKFTGKPA ADFIRDLAGA PPLKKAVGVA VINALAESCR
KRRPDDACVT DAGKDALETL LLPEMGYVVV VGALVPIIKR LKVRGKPFGI LELDLRTLKP
DELPFAIPPG KADAEIRRAD MLVITGTTLL NNTLEPLLAS ARPGAEIVVV GPTASMLPAA
FFRRGVTVLG GDVVTDPDRL LDTIAEGGSG YHFFGKSAEK TLTRQR