Gene Mboo_2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2359 
Symbol 
ID5411635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2424283 
End bp2424855 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID640869615 
Productformylmethanofuran dehydrogenase, subunit E region 
Protein accessionYP_001405516 
Protein GI154151898 
COG category[C] Energy production and conversion 
COG ID[COG2191] Formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0396741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ACGACATACT ATTCAACAAA GCAAAAGAGT TCCACGGGCA CGTCTGCCCC 
GGCATTGTTC TTGGGACACG GCTTACCCTC GCCGGCCTCC GCGAAGTGGG GATAAATCCC
CACGAACCGA TTCACAACCT GATCGTGTTC ATGGAGATCG ACCGGTGCGG CACCGATGCC
GTCCAGGCCA TTACCGGCTG TTCCCTGGGC CACCGCAGTC TCAAACACAA GGATTTCGGG
AAATTCGCTG CAACGTTTGT AAATACCACG ACCGGAAAAA CTATCCGTGT CTCGGTCCAC
GAGAAGAACC GGGCCGAACA TGACAAGATC GATCGAAAAG AGCTCATCAC GGTACTCTCC
TGTATTCCCG AAGAAGAGAT CCTGAAGATT GAACAGGTCC GGCTTGCCAT CCCCCGGGAA
GATCTCCCCG GGCTTCCCGT GGGGAATGCA GTGTGCAGTG TATGCGGAGA GCAGATCTCC
GATAACCGGC AGATTGTCCG GGATGGAGCT GTATTCTGCA GGAACTGTGC CGGTGAATCG
TACTACACGG TCATCCCTAG AAAATCTGCT TGA
 
Protein sequence
MSDYDILFNK AKEFHGHVCP GIVLGTRLTL AGLREVGINP HEPIHNLIVF MEIDRCGTDA 
VQAITGCSLG HRSLKHKDFG KFAATFVNTT TGKTIRVSVH EKNRAEHDKI DRKELITVLS
CIPEEEILKI EQVRLAIPRE DLPGLPVGNA VCSVCGEQIS DNRQIVRDGA VFCRNCAGES
YYTVIPRKSA