Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2357 |
Symbol | |
ID | 5411886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2422743 |
End bp | 2423441 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869613 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_001405514 |
Protein GI | 154151896 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0504614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCG ACAGGGTGAA AATGGGAATC CCCGGGCTTG ACGAAATGCT CGGAGGCGGG CTGCTTGCAG GGAACATCTG TGCCGTCATC GGGACGTACG GTACCGGAAA AACTACCTTT TCGCTGAACT TTATCTGGGA CGGGCTTAAA CGGGGCGAGC GGGCGATCTA TATCAGCCTC GAAGAACGGG AGGACCGCCT GCTCCAGTAC ATGAAACAGA AAGGCTGGGA CGTGGAGCCG TACCTCAACA AATCCCTCTT TATCATCAAG CTCGACCCAA CGGATTTCAA CCTCGCGAAC AACCGGATCA AAAACGAGCT CCCCAACCTG ATCAGCGAGG TAAAGGCGAG CCGGGTGGTG ATCGATCCGA TCTCGCTCTT TGAAGACCTT TTTTCAAGCG ATGCCGAAAG GCGGCGCGAA ATGTTCCGGT TTATCGACGG GCTGCGGGAA AAGAATTGCA CCATGATGAT GACCTCCGAG ACCAACAGCG ACAATGTCTT TTCGAGCCGT CACGGACTCA TCGAATACCT GGCAGATACG GTCATCCTGC TCCGCTATGT CCGCTCAAGC GATCTCACCG ATGTCTACCT GGCGCTTGAA GTGGTCAAGA TGCGGATGTC GTCTCATTCC CGGGAGATCA AGCCTTACGC GATCGAGCAG ACGCAGGTCA CGGTCTTCTC GGAAGCAAAC GTGTTTTGA
|
Protein sequence | MNSDRVKMGI PGLDEMLGGG LLAGNICAVI GTYGTGKTTF SLNFIWDGLK RGERAIYISL EEREDRLLQY MKQKGWDVEP YLNKSLFIIK LDPTDFNLAN NRIKNELPNL ISEVKASRVV IDPISLFEDL FSSDAERRRE MFRFIDGLRE KNCTMMMTSE TNSDNVFSSR HGLIEYLADT VILLRYVRSS DLTDVYLALE VVKMRMSSHS REIKPYAIEQ TQVTVFSEAN VF
|
| |