Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2356 |
Symbol | |
ID | 5411885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2421919 |
End bp | 2422746 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869612 |
Product | HTR-like protein |
Protein accession | YP_001405513 |
Protein GI | 154151895 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0927177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.984373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGAAT CACAGGAAAC CAGAATGCCC ACCGGGATCG CATCGCTCGA TCCTATCCTT GATGGGGGCG TCCCGCCGGG AACCCTGACC CTCCTTTTTG GCGATATCGG GGCCGGACAC TACGAATTTG CCTACAGCTC CACGGTAAAC TCCCTTGCAG AGATGCACCG GGTTCCCGGG GCCGGTATCC TGTACCCCAA AAAGATCCTG TACATCACGT TTACCCGGCT GGAGGCCGAT ATCAGGCGCG AGATCGTCCA GTCGTTTCCC ACCGGTTCAG TGCCCGGCGG GATGGAGGGG ATCGCGTTTG AGGATCTCTC GGATCTCTAT TTCGACCGGA GCATTGTGCC GGACTCCTGG TACAGCCGCA GTGATACGCT GACCCGGCTC CAGAAGCGCT CCGAACATGC CAACATCTTC ATGCGGCTCA CGGAAATATT TGCGGCAGCA GAGCCGGAGA CTATGATCAT CCTCGATTCG ATCACCGATA TTGCAACCCA GACAAACCTT CCCAATCTCT GGGCAGACCT GACCGGTTTT CTCCGGGGCC TCCAGCGGTT TGCAAAGACA AAACGCCTGG CCATCTACCT GCTGCTCAGC CGGGGGATCA TCGAACAGGC AAAGGAGATC GAACTGGCCG ATATCGCCGA TGCCGTATTT TTGTTCCGGT GGGAGGAGAG CACCGGCTCG CGGCGCCAGC GGGTGATGTA TTTCGAGAAG TTCCGGGGGG TCATGCCGCA TCTCGAAGAG CAGGACCTGG TGAAATTTGC CGTCAGGATC TCCACCACCG GGGGATTTGA AGTGAGCAAT ATCAGGATGG TCATATGA
|
Protein sequence | MQESQETRMP TGIASLDPIL DGGVPPGTLT LLFGDIGAGH YEFAYSSTVN SLAEMHRVPG AGILYPKKIL YITFTRLEAD IRREIVQSFP TGSVPGGMEG IAFEDLSDLY FDRSIVPDSW YSRSDTLTRL QKRSEHANIF MRLTEIFAAA EPETMIILDS ITDIATQTNL PNLWADLTGF LRGLQRFAKT KRLAIYLLLS RGIIEQAKEI ELADIADAVF LFRWEESTGS RRQRVMYFEK FRGVMPHLEE QDLVKFAVRI STTGGFEVSN IRMVI
|
| |