| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2329 |
|---|
| Symbol | |
|---|
| ID | 5410524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2395509 |
|---|
| End bp | 2396855 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640869585 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001405486 |
|---|
| Protein GI | 154151868 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTG TCCTGGGCGG GGGCCCGGCC GGGCGGATAG CCTCGATCCG GCTTGCCTCT
GCCGGAAAAA AAGTCACGCT TGTCGAACCC AAAGGAAAAG AGCAGGGGAT CGGCGGGCAG
TGCCTCCATT TTGGCTGTAT GCCGGTCTGT GCCTTAAACG ACGCCGCACG CATCGCTGCA
ACCACGCGCA GGTTTTACAA GCGCGGGATG ATCGATACCC TGCCCGCGTT CCGGTTCGGA
AAACTGATGG ACGAGACGTA TGTTGTCCAG CAGAAGATCT CGGGCATTCT TGATGATGAA
ACCCGGCAGG CCGGCGTGGA TGTGGTGTAC GGCAAAGCCG GCCGGGTTGA CGGACGACAA
GTCTTTATCG GCGACGAGCC GGTTGACTGC GAGGCTGCGA TCATCGCCAC CGGTTCCCGG
CCCAACATCC CGGCAATCCC CGGCGTTTCG CTCCCCGGGG TGTACACACC GCACACCCTC
TGGAGCCTTC GCGAGCTCCC AAAAAAAATT GCAATCATCG GCGGGAGCGT GATGGCAGCA
GAGTTTGCGT ACATCTTTTC TGAGTTCGGG AGCGAGGTTA CGGTGCTTGC CCGGAGCGGT
TTTTTGAAAA ACCTGGACCG GCATCTCCGG GCGGTCGCGA TGAAAGAATT ATCGGGTGTG
AATATACAGG AGGAGACCGA AGTTGCCGGG ATCGCCGGGA CGGACCTGAC CACAGGGGTC
CGGTACCGGG CTGCCGGAAC AGAGAGGGCA ATTTCGGCTG ATGCCGTGCT GCTCGCAGCT
GGCCTGGTGC CAAACTCCGG CATGGTAACG GGGATCGACA AAGGACCGGA TGGCGCGATC
ATCGTCAACG ACCGGATGCA GACAAGCGTG CCCGGCATCT ATGCCTGCGG GGACGTGGCA
GGCGCCCCGT TCCTGACCCC GGTTGCTCGG CACGAGGGCA TTGTTGCGGC GGATAATATT
CTGGGAAAAG AGCGGCACAT GGACTATTCC CGGATCCCGC AGGCAATCTA CCTTGCCCAT
GAGCTCGCCT TCTGCGGTAG CAGTGGCGAG GGGAGCGCCT CGATTGCCCT GCCCGGCCCG
GCAGGGCCGG GAACCTACTG GTCGGTGCAA TACGGAGATA CCGGGCTTGC CAAGCTCTTT
GCCGATCCTG CAACGGGTGA GATCGAGGGG ATCTGTGCCG CGGGGCCTTC GGGAGGGACC
GTTGCCGCCT ATCTTGCGTT TCTCATGCAG CGGGAGATCT CCGTGCACGA ATTCGAAGAT
TTTATCGAGG TCCACCCGTC CACGGACGGG ATTTATGGTC TTGCCAAATA CGCTTCGGAG
ATTTTCAGGA AGCGGGACTC CTCCTGA
|
|---|
| Protein sequence | MIVVLGGGPA GRIASIRLAS AGKKVTLVEP KGKEQGIGGQ CLHFGCMPVC ALNDAARIAA
TTRRFYKRGM IDTLPAFRFG KLMDETYVVQ QKISGILDDE TRQAGVDVVY GKAGRVDGRQ
VFIGDEPVDC EAAIIATGSR PNIPAIPGVS LPGVYTPHTL WSLRELPKKI AIIGGSVMAA
EFAYIFSEFG SEVTVLARSG FLKNLDRHLR AVAMKELSGV NIQEETEVAG IAGTDLTTGV
RYRAAGTERA ISADAVLLAA GLVPNSGMVT GIDKGPDGAI IVNDRMQTSV PGIYACGDVA
GAPFLTPVAR HEGIVAADNI LGKERHMDYS RIPQAIYLAH ELAFCGSSGE GSASIALPGP
AGPGTYWSVQ YGDTGLAKLF ADPATGEIEG ICAAGPSGGT VAAYLAFLMQ REISVHEFED
FIEVHPSTDG IYGLAKYASE IFRKRDSS
|
|---|
| |