Gene Mboo_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2303 
Symbol 
ID5411258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2373929 
End bp2374273 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content53% 
IMG OID640869557 
Productanti-sigma-factor antagonist 
Protein accessionYP_001405460 
Protein GI154151842 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.923761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCT GCACAGTCCG GGAAAAAGGT GACTGCCTCA TCGTCACCCT GCCCGTTTCT 
CTCGATCACG TGGAAGCCAT GGCCCTGGAA AAGGAGCTCC GGGAATATGT TGCACGCGAA
CCAAAGGCAC TCCTCTGCGA CATGTCCGGA TCAGAATATA TATCGAGCTC GGGGCTCCGG
GTGTTCCTTG CCATCGGGAA AAAGGCAAAA GAATCCCATG TCCACTTCGG TGTCTTTGCG
CTCACGAAAT TTGTCGACCA TATCATTTCC ATGACCGGGT TTACACAGAT TATTGCCATC
TACGATACCG AAGAGGCAGC AGTCCGGGCA GTATCCCGGC TCTAA
 
Protein sequence
MALCTVREKG DCLIVTLPVS LDHVEAMALE KELREYVARE PKALLCDMSG SEYISSSGLR 
VFLAIGKKAK ESHVHFGVFA LTKFVDHIIS MTGFTQIIAI YDTEEAAVRA VSRL