Gene Mboo_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2252 
Symbol 
ID5409940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2320465 
End bp2320941 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID640869504 
Productribosomal protein L11 
Protein accessionYP_001405409 
Protein GI154151791 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000879561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.135742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG TGGTCGAGGT TTTAGTACCC GGCGGGAAGG CAACCGCAGG TCCGCCATTA 
GGACCCGCGC TCGGACCACT CGGTATCAAC GTGAAGGCAG TCGTCGATGA GATCAACGCC
AAGACCGCGT CATTCAATGG AATGCAGGTC CCGGTCAAGG TCGAAGTCAA CGATAAGAAG
CAGTTCACGG TCACGGTGGG TATCCCACCG ACGACGGCTC TCATCAAGAA AGAGGCCAAT
ATCGAGAAAG GATCCGCAGA GCCCAACGCC AAAGTGGCAG GAAACCTGCC ATTCGAGGCC
GCTGTCAGGA TTGCCAAGAT GAAACTCGAA GGCATGCTCT CCTACGAGCT CAAGACTGCC
ACAAAGGAAG TCGTGGGTAC GTGTGTAAGC ATGGGAGTCA ACGTTGACGG CAAGCGCCCC
AAAGAAGTGC TCGCCGACAT CGCTGCTGGC AAGTATGACA GCGTCCTTCT GAAGTAA
 
Protein sequence
MAEVVEVLVP GGKATAGPPL GPALGPLGIN VKAVVDEINA KTASFNGMQV PVKVEVNDKK 
QFTVTVGIPP TTALIKKEAN IEKGSAEPNA KVAGNLPFEA AVRIAKMKLE GMLSYELKTA
TKEVVGTCVS MGVNVDGKRP KEVLADIAAG KYDSVLLK