| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2251 |
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| Symbol | rpl1P |
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| ID | 5409939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2319763 |
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| End bp | 2320407 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869503 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_001405408 |
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| Protein GI | 154151790 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000243616 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.144507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAAA GGGCAAAAAT TCTGGAAGCC GTAACAACGG CGATTGAAAA GGCGCCAAAG
CGGAAGTTCT CCGAAAGCAT CGATATTACC ATCAATCTCA AGAATATCGA TATGGCGCAG
CCGAAAAATC GTATCGACGA GACGATACTG CTCCCGAACG GGACCGGAGA AAAGACCGGG
ATCTGTGTCA TCGGGAGAGG TGATATCGTC ACGCAGGCAA AGGATGCCAA GGTTGATCTG
ATTCTCGGCC CTGATGAGGT AGAACGGCTG GGAGGCGCCC CGCGTGAAGC ACGCAGGGTC
GCAAGCTCTT ACAAGTACTT CCTTGCCGAG ACCGCGGTCA TGCCGCAGGT CGGTCGTTTC
CTGGGTCCCC GGCTCGGTCC GCGGGGCAGG ATGCCGATGC CGATCCCCGG ACAGACCGAT
ATCCGCCCGA TTGTCGAGCG TCTCCGTAAC TCGGTGAAGA TCAGGACCAA GGACAAGACG
GTCTTCTCCA CCAAGGTTGG TTCGACGGCC ATGACACCGG AGCAGGTATC CGAAAACATC
GACGCGATCC TCAAGCGTGT CGAGTCCGTC CTCGAACAGG GTCACTTAAA CGTCCGCTCG
GTCTTTGTCA AGACAACGAT GGGCCCGTCC GTGAGGCTGG TATAA
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| Protein sequence | MVERAKILEA VTTAIEKAPK RKFSESIDIT INLKNIDMAQ PKNRIDETIL LPNGTGEKTG
ICVIGRGDIV TQAKDAKVDL ILGPDEVERL GGAPREARRV ASSYKYFLAE TAVMPQVGRF
LGPRLGPRGR MPMPIPGQTD IRPIVERLRN SVKIRTKDKT VFSTKVGSTA MTPEQVSENI
DAILKRVESV LEQGHLNVRS VFVKTTMGPS VRLV
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